29 Search Results for "Gupta, Manoj"


Document
Dynamic MIS Revisited: Incremental, Fault Tolerant and Fully Dynamic

Authors: Manoj Gupta, Shahbaz Khan, and Madhu Surendra

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)


Abstract
Given a dynamic graph G, we aim to maintain a maximal independent set (MIS). This problem admits a deterministic solution in O(m^{2/3}) time [SOSA21], while randomized algorithms for oblivious adversary take O(polylog n) [FOCS19] time. Recently, Bernstein et al. [SODA26] proved a conditional lower bound of Ω(n^{1-o(1)}) amortized update time even for incremental MIS with adaptive adversary. In this paper, we establish similar deterministic bounds through the lens of incremental and fault tolerant algorithms for MIS, and show the following: 1) Incremental: MIS can be maintained under edge insertions in O(√m) amortized update time. 2) Fault Tolerant: Using O(m) preprocessing time, the MIS can be reported after k edge deletions in O(k+ ̅{n}²) time, where ̅{n} is the number of vertices on which deleted edges are incident. 3) Fully Dynamic: MIS can be maintained under fully dynamic edge updates (insertions and deletions) in O(m^{2/3}) amortized update time. Our incremental result is thus polynomially optimal even on allowing randomization with an adaptive adversary. Our fully dynamic result matches the state-of-the-art [SOSA21], and uses our incremental and fault tolerant algorithms as a black box. Although our fully dynamic algorithm does not improve the existing bounds, it provides additional insights into the harder edge-insertion case. We believe these insights may potentially be useful for improving the bounds for fully dynamic MIS in the future to match the incremental MIS bounds.

Cite as

Manoj Gupta, Shahbaz Khan, and Madhu Surendra. Dynamic MIS Revisited: Incremental, Fault Tolerant and Fully Dynamic. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 21:1-21:11, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{gupta_et_al:LIPIcs.SWAT.2026.21,
  author =	{Gupta, Manoj and Khan, Shahbaz and Surendra, Madhu},
  title =	{{Dynamic MIS Revisited: Incremental, Fault Tolerant and Fully Dynamic}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{21:1--21:11},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.21},
  URN =		{urn:nbn:de:0030-drops-260577},
  doi =		{10.4230/LIPIcs.SWAT.2026.21},
  annote =	{Keywords: Maximal Independent Set, MIS, Incremental, Fault Tolerant, Fully dynamic}
}
Document
Optimal Verification of a Minimum-Weight Basis in an Uncertainty Matroid

Authors: Haya Diwan, Lisa Hellerstein, Nicole Megow, and Jens Schlöter

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)


Abstract
Research in explorable uncertainty addresses combinatorial optimization problems where there is partial information about the values of numeric input parameters, and exact values of these parameters can be determined by performing costly queries. The goal is to design an adaptive query strategy that minimizes the query cost incurred in computing an optimal solution. Solving such problems generally requires that we be able to solve the associated verification problem: given the answers to all queries in advance, find a minimum-cost set of queries that certifies an optimal solution to the combinatorial optimization problem. We present a polynomial-time algorithm for verifying a minimum-weight basis of a matroid, where each weight lies in a given uncertainty area. These areas may be finite sets, real intervals, or unions of open and closed intervals, strictly generalizing previous work by Erlebach and Hoffman which only handled the special case of open intervals. Our algorithm introduces new techniques to address the resulting challenges. Verification problems are of particular importance in the area of explorable uncertainty, as the structural insights and techniques used to solve the verification problem often heavily influence work on the corresponding online problem and its stochastic variant. In our case, we use structural results from the verification problem to give a best-possible algorithm for a promise variant of the corresponding adaptive online problem. Finally, we show that our algorithms can be applied to two learning-augmented variants of the minimum-weight basis problem under explorable uncertainty.

Cite as

Haya Diwan, Lisa Hellerstein, Nicole Megow, and Jens Schlöter. Optimal Verification of a Minimum-Weight Basis in an Uncertainty Matroid. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 32:1-32:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{diwan_et_al:LIPIcs.STACS.2026.32,
  author =	{Diwan, Haya and Hellerstein, Lisa and Megow, Nicole and Schl\"{o}ter, Jens},
  title =	{{Optimal Verification of a Minimum-Weight Basis in an Uncertainty Matroid}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{32:1--32:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.32},
  URN =		{urn:nbn:de:0030-drops-255216},
  doi =		{10.4230/LIPIcs.STACS.2026.32},
  annote =	{Keywords: Matroid verification, minimum-weight basis, query strategy, uncertainty matroid, explorable uncertainty}
}
Document
Maximum-Flow and Minimum-Cut Sensitivity Oracles for Directed Graphs

Authors: Mridul Ahi, Keerti Choudhary, Shlok Pande, Pushpraj, and Lakshay Saggi

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
This paper addresses the problem of designing fault-tolerant data structures for the (s,t)-max-flow and (s,t)-min-cut problems in unweighted directed graphs. Given a directed graph G = (V, E) with a designated source s, sink t, and an (s,t)-max-flow of value λ, we present constructions for max-flow and min-cut sensitivity oracles, and introduce the concept of a fault-tolerant flow family, which may be of independent interest. Our main contributions are as follows. 1) Fault-Tolerant Flow Family: We construct a family ℬ of 2λ+1 (s,t)-flows such that for every edge e, ℬ contains an (s,t)-max-flow of G-e. This covering property is tight up to constants for single failures and provably cannot extend to comparably small families for k ≥ 2, where we show an Ω(n) lower bound on the family size, independent of λ. 2) Max-Flow Sensitivity Oracle: Using the fault-tolerant flow family, we construct a single as well as dual-edge sensitivity oracle for (s,t)-max-flow that requires only O(λ n) space. Given any set F of up to two failing edges, the oracle reports the updated max-flow value in G-F in O(n) time. Additionally, for the single-failure case, the oracle can determine in constant time whether the flow through an edge x changes when another edge e fails. 3) Min-Cut Sensitivity Oracle for Dual Failures: Recently, Baswana et al. (ICALP’22) designed an O(n²)-sized oracle for answering (s,t)-min-cut size queries under dual edge failures in constant time, along with a matching lower bound. We extend this by focusing on graphs with small min-cut values λ, and present a more compact oracle of size O(λ n) that answers such min-cut size queries in constant time and reports the corresponding (s,t)-min-cut partition in O(n) time. We also show that the space complexity of our oracle is asymptotically optimal in this setting. 4) Min-Cut Sensitivity Oracle for Multiple Failures: We extend our results to the general case of k edge failures. For any graph with (s,t)-min-cut of size λ, we construct a k-fault-tolerant min-cut oracle with space complexity O_{λ,k}(n log n) that answers min-cut size queries in O_{λ,k}(log n) time. This also leads to improved fault-tolerant (s,t)-reachability oracles, achieving O(n log n) space and O(log n) query time for up to k = O(1) edge failures.

Cite as

Mridul Ahi, Keerti Choudhary, Shlok Pande, Pushpraj, and Lakshay Saggi. Maximum-Flow and Minimum-Cut Sensitivity Oracles for Directed Graphs. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 5:1-5:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{ahi_et_al:LIPIcs.ITCS.2026.5,
  author =	{Ahi, Mridul and Choudhary, Keerti and Pande, Shlok and Pushpraj and Saggi, Lakshay},
  title =	{{Maximum-Flow and Minimum-Cut Sensitivity Oracles for Directed Graphs}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{5:1--5:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.5},
  URN =		{urn:nbn:de:0030-drops-252920},
  doi =		{10.4230/LIPIcs.ITCS.2026.5},
  annote =	{Keywords: Fault tolerance, Data structures, Minimum cuts, Maximum flows}
}
Document
Improved Rate for Non-Malleable Codes and Time-Lock Puzzles

Authors: Cody Freitag, Ilan Komargodski, Manu Kondapaneni, and Jad Silbak

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
Non-malleable codes allow a sender to transmit a message to a receiver, while providing a "best-possible" integrity guarantee to ensure that no attacker - who cannot already decode the message - can meaningfully tamper the message in transit. If tampered, the received message should either be invalid or unrelated to the original message. Non-malleable time-lock puzzles (TLPs) are a special case of non-malleable codes for bounded polynomial-depth tampering with very efficient encoding. In this work, we give generic techniques for constructing non-malleable codes and non-malleable TLPs with improved rate, which captures the ratio of a message’s length to its encoding length. A key contribution of our work is identifying a security notion for non-malleability, which we term "CCA-hiding", sufficient for our compilers. CCA-hiding is a relaxation of CCA-security for encryption or commitments to the fine-grained setting of codes, and requires that the encoded message remains hidden, even given a decoding oracle for any other codeword. Intriguingly, CCA-hiding does not imply non-malleability in the fine-grained setting, as is the case for encryption and commitments. Using our new techniques, we give the following constructions: - Rate-1 CCA-hiding TLPs in the plain model. - Rate-1 non-malleable codes for bounded polynomial-depth tampering in the auxiliary-input random oracle model (AI-ROM). - Rate-(1/2) non-malleable TLPs in the AI-ROM.

Cite as

Cody Freitag, Ilan Komargodski, Manu Kondapaneni, and Jad Silbak. Improved Rate for Non-Malleable Codes and Time-Lock Puzzles. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 62:1-62:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{freitag_et_al:LIPIcs.ITCS.2026.62,
  author =	{Freitag, Cody and Komargodski, Ilan and Kondapaneni, Manu and Silbak, Jad},
  title =	{{Improved Rate for Non-Malleable Codes and Time-Lock Puzzles}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{62:1--62:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.62},
  URN =		{urn:nbn:de:0030-drops-253490},
  doi =		{10.4230/LIPIcs.ITCS.2026.62},
  annote =	{Keywords: Non-malleable codes, Time-lock puzzles}
}
Document
Fault-Tolerant Approximate Distance Oracles with a Source Set

Authors: Dipan Dey and Telikepalli Kavitha

Published in: LIPIcs, Volume 360, 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)


Abstract
Our input is an undirected weighted graph G = (V,E) on n vertices along with a source set S ⊆ V. The problem is to preprocess G and build a compact data structure such that upon query Qu(s,v,f) where (s,v) ∈ S×V and f is any faulty edge, we can quickly find a good estimate (i.e., within a small multiplicative stretch) of the s-v distance in G-f. We use a fault-tolerant ST-distance oracle from the work of Bilò et al. (STACS 2018) to construct an S×V approximate distance oracle or sourcewise approximate distance oracle of size Õ(|S|n + n^{3/2}) with multiplicative stretch at most 5. We construct another fault-tolerant sourcewise approximate distance oracle of size Õ(|S|n + n^{4/3}) with multiplicative stretch at most 13. Both the oracles have O(1) query answering time.

Cite as

Dipan Dey and Telikepalli Kavitha. Fault-Tolerant Approximate Distance Oracles with a Source Set. In 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 360, pp. 27:1-27:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{dey_et_al:LIPIcs.FSTTCS.2025.27,
  author =	{Dey, Dipan and Kavitha, Telikepalli},
  title =	{{Fault-Tolerant Approximate Distance Oracles with a Source Set}},
  booktitle =	{45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)},
  pages =	{27:1--27:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-406-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{360},
  editor =	{Aiswarya, C. and Mehta, Ruta and Roy, Subhajit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2025.27},
  URN =		{urn:nbn:de:0030-drops-251081},
  doi =		{10.4230/LIPIcs.FSTTCS.2025.27},
  annote =	{Keywords: Weighted graphs, approximate distances, fault-tolerant data structures}
}
Document
On the Randomized Locality of Matching Problems in Regular Graphs

Authors: Seri Khoury, Manish Purohit, Aaron Schild, and Joshua R. Wang

Published in: LIPIcs, Volume 356, 39th International Symposium on Distributed Computing (DISC 2025)


Abstract
The main goal in distributed symmetry-breaking is to understand the locality of problems: the radius of the neighborhood that a node must explore to determine its part of a global solution. In this work, we study the locality of matching problems in the family of regular graphs, which is one of the main benchmarks for establishing lower bounds on the locality of symmetry-breaking problems, as well as for obtaining classification results. Our main results are summarized as follows: 1) Approximate matching: We develop randomized algorithms to show that (1 + ε)-approximate matching in regular graphs is truly local, i.e., the locality depends only on ε and is independent of all other graph parameters. Furthermore, as long as the degree Δ is not very small (namely, as long as Δ ≥ poly(1/ε)), this dependence is only logarithmic in 1/ε. This stands in sharp contrast to maximal matching in regular graphs which requires some dependence on the number of nodes n or the degree Δ. 2) Maximal matching: Our techniques further allow us to establish a strong separation between the node-averaged complexity and worst-case complexity of maximal matching in regular graphs, by showing that the former is only O(1). Central to our main technical contribution is a novel martingale-based analysis for the ≈ 40-year-old algorithm by Luby. In particular, our analysis shows that applying one round of Luby’s algorithm on the line graph of a Δ-regular graph results in an almost Δ/2-regular graph.

Cite as

Seri Khoury, Manish Purohit, Aaron Schild, and Joshua R. Wang. On the Randomized Locality of Matching Problems in Regular Graphs. In 39th International Symposium on Distributed Computing (DISC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 356, pp. 40:1-40:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{khoury_et_al:LIPIcs.DISC.2025.40,
  author =	{Khoury, Seri and Purohit, Manish and Schild, Aaron and Wang, Joshua R.},
  title =	{{On the Randomized Locality of Matching Problems in Regular Graphs}},
  booktitle =	{39th International Symposium on Distributed Computing (DISC 2025)},
  pages =	{40:1--40:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-402-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{356},
  editor =	{Kowalski, Dariusz R.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DISC.2025.40},
  URN =		{urn:nbn:de:0030-drops-248570},
  doi =		{10.4230/LIPIcs.DISC.2025.40},
  annote =	{Keywords: regular graphs, maximum matching, augmenting paths, distributed algorithms, Luby’s algorithm, martingales}
}
Document
On the Complexity of Knapsack Under Explorable Uncertainty: Hardness and Algorithms

Authors: Jens Schlöter

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
In the knapsack problem under explorable uncertainty, we are given a knapsack instance with uncertain item profits. Instead of having access to the precise profits, we are only given uncertainty intervals that are guaranteed to contain the corresponding profits. The actual item profit can be obtained via a query. The goal of the problem is to adaptively query item profits until the revealed information suffices to compute an optimal (or approximate) solution to the underlying knapsack instance. Since queries are costly, the objective is to minimize the number of queries. In the offline variant of this problem, we assume knowledge of the precise profits and the task is to compute a query set of minimum cardinality that a third party without access to the profits could use to identify an optimal (or approximate) knapsack solution. We show that this offline variant is complete for the second-level of the polynomial hierarchy, i.e., Σ₂^p-complete, and cannot be approximated within a non-trivial factor unless Σ₂^p = Δ₂^p. Motivated by these strong hardness results, we consider a "resource-augmented" variant of the problem where the requirements on the query set computed by an algorithm are less strict than the requirements on the optimal solution we compare against. More precisely, a query set computed by the algorithm must reveal sufficient information to identify an approximate knapsack solution, while the optimal query set we compare against has to reveal sufficient information to identify an optimal solution. We show that this resource-augmented setting allows interesting non-trivial algorithmic results.

Cite as

Jens Schlöter. On the Complexity of Knapsack Under Explorable Uncertainty: Hardness and Algorithms. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 6:1-6:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{schloter:LIPIcs.ESA.2025.6,
  author =	{Schl\"{o}ter, Jens},
  title =	{{On the Complexity of Knapsack Under Explorable Uncertainty: Hardness and Algorithms}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{6:1--6:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.6},
  URN =		{urn:nbn:de:0030-drops-244740},
  doi =		{10.4230/LIPIcs.ESA.2025.6},
  annote =	{Keywords: Explorable uncertainty, knapsack, queries, approximation algorithms}
}
Document
Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems

Authors: Inhoo Lee, Salvador Buse, and Erik Winfree

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)


Abstract
Many molecular systems are best understood in terms of prototypical species and reactions. The central dogma and related biochemistry are rife with examples: gene i is transcribed into RNA i, which is translated into protein i; kinase n phosphorylates substrate m; protein p dimerizes with protein q. Engineered nucleic acid systems also often have this form: oligonucleotide i hybridizes to complementary oligonucleotide j; signal strand n displaces the output of seesaw gate m; hairpin p triggers the opening of target q. When there are many variants of a small number of prototypes, it can be conceptually cleaner and computationally more efficient to represent the full system in terms of indexed species (e.g. for dimerization, M_p, D_pq) and indexed reactions (M_p + M_q → D_pq). Here, we formalize the Indexed Chemical Reaction Network (ICRN) model and describe a Python software package designed to simulate such systems in the well-mixed and reaction-diffusion settings, using a differentiable programming framework originally developed for large-scale neural network models, taking advantage of GPU acceleration when available. Notably, this framework makes it straightforward to train the models’ initial conditions and rate constants to optimize a target behavior, such as matching experimental data, performing a computation, or exhibiting spatial pattern formation. The natural map of indexed chemical reaction networks onto neural network formalisms provides a tangible yet general perspective for translating concepts and techniques from the theory and practice of neural computation into the design of biomolecular systems.

Cite as

Inhoo Lee, Salvador Buse, and Erik Winfree. Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 4:1-4:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lee_et_al:LIPIcs.DNA.31.4,
  author =	{Lee, Inhoo and Buse, Salvador and Winfree, Erik},
  title =	{{Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{4:1--4:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.4},
  URN =		{urn:nbn:de:0030-drops-238534},
  doi =		{10.4230/LIPIcs.DNA.31.4},
  annote =	{Keywords: Differentiable Programming, Chemical Reaction Networks, Reaction-Diffusion Systems}
}
Document
Algorithms for Computing Very Large BWTs: a Short Survey

Authors: Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)


Abstract
The Burrows-Wheeler Transform (BWT) is a fundamental string transformation that, although initially introduced for data compression, has been extensively utilized across various domains, including text indexing and pattern matching within large datasets. Although the BWT construction is linear, the constants make the task impractical for large datasets, and as highlighted by Ferragina et al. [Paolo Ferragina et al., 2012], "to use it, one must first build it!". Thus, the construction of the BWT remains a significant challenge. For these reasons, during the past three decades there has been a succession of new algorithms for its construction using techniques that work in external memory or that use text compression. In this survey, we revise some of the most important advancements and tools presented in the past years for computing large BWTs exploiting external memory or text compression approaches without using additional information about the data.

Cite as

Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone. Algorithms for Computing Very Large BWTs: a Short Survey. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 7:1-7:28, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{diazdominguez_et_al:OASIcs.Manzini.7,
  author =	{D{\'\i}az-Dom{\'\i}nguez, Diego and Egidi, Lavinia and Guerrini, Veronica and Louza, Felipe A. and Rosone, Giovanna},
  title =	{{Algorithms for Computing Very Large BWTs: a Short Survey}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{7:1--7:28},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.7},
  URN =		{urn:nbn:de:0030-drops-239151},
  doi =		{10.4230/OASIcs.Manzini.7},
  annote =	{Keywords: Burrows-Wheeler transform, Extended Burrows-Wheeler transform, external memory, text compression, longest common prefix}
}
Document
Track A: Algorithms, Complexity and Games
Dynamic Algorithms for Submodular Matching

Authors: Kiarash Banihashem, Leyla Biabani, Samira Goudarzi, MohammadTaghi Hajiaghayi, Peyman Jabbarzade, and Morteza Monemizadeh

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
The Maximum Submodular Matching (MSM) problem is a generalization of the classical Maximum Weight Matching (MWM) problem. In this problem, given a monotone submodular function f: 2^E → ℝ^{≥ 0} defined over subsets of edges of a graph G(V, E), we are asked to return a matching whose submodular value is maximum among all matchings in graph G(V, E). In this paper, we consider this problem in a fully dynamic setting against an oblivious adversary. In this setting, we are given a sequence 𝒮 of insertions and deletions of edges of the underlying graph G(V, E), along with an oracle access to the monotone submodular function f. The goal is to maintain a matching M such that, at any time t of sequence 𝒮, its submodular value is a good approximation of the value of the optimal submodular matching while keeping the number of operations minimal. We develop the first dynamic algorithm for the submodular matching problem, in which we maintain a matching whose submodular value is within expected (8 + ε)-approximation of the optimal submodular matching at any time t of sequence 𝒮 using expected amortized poly(log n, 1/(ε)) update time. Our approach incorporates a range of novel techniques, notably the concept of Uniform Hierarchical Caches (UHC) data structure along with its invariants, which lead to the first algorithm for fully dynamic submodular matching and may be of independent interest for designing dynamic algorithms for other problems.

Cite as

Kiarash Banihashem, Leyla Biabani, Samira Goudarzi, MohammadTaghi Hajiaghayi, Peyman Jabbarzade, and Morteza Monemizadeh. Dynamic Algorithms for Submodular Matching. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 19:1-19:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{banihashem_et_al:LIPIcs.ICALP.2025.19,
  author =	{Banihashem, Kiarash and Biabani, Leyla and Goudarzi, Samira and Hajiaghayi, MohammadTaghi and Jabbarzade, Peyman and Monemizadeh, Morteza},
  title =	{{Dynamic Algorithms for Submodular Matching}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{19:1--19:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.19},
  URN =		{urn:nbn:de:0030-drops-233969},
  doi =		{10.4230/LIPIcs.ICALP.2025.19},
  annote =	{Keywords: Matching, Submodular, Dynamic, Polylogarithmic}
}
Document
Track A: Algorithms, Complexity and Games
Minimum+1 Steiner Cut and Dual Edge Sensitivity Oracle: Bridging Gap between Global and (s,t)-cut

Authors: Koustav Bhanja

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
Let G = (V,E) be an undirected multi-graph on n = |V| vertices and S ⊆ V be a Steiner set in G. Steiner cut is a fundamental concept; moreover, global cut (|S| = n), as well as (s,t)-cut (|S| = 2), is just a special case of Steiner cut. We study Steiner cuts of capacity minimum+1, and as an important application, we provide a dual edge Sensitivity Oracle for Steiner mincut - a compact data structure for efficiently reporting a Steiner mincut after failure/insertion of any pair of edges. A compact data structure for cuts of capacity minimum+1 has been designed for both global cuts [Dinitz and Nutov, STOC 1995] and (s,t)-cuts [Baswana, Bhanja, and Pandey, ICALP 2022 & TALG 2023]. Moreover, both data structures are also used crucially to design a dual edge Sensitivity Oracle for their respective mincuts. Unfortunately, except for these two extreme scenarios of Steiner cuts, no generalization of these results is known. Therefore, to address this gap, we present the following first results on Steiner cuts for any S satisfying 2 ≤ |S| ≤ n. 1) Data Structure for Minimum+1 Steiner Cut: There is an {O}(n(n-|S|+1)) space data structure that, given any pair of vertices u,v, can determine in {O}(1) time whether the Steiner cut of the least capacity separating u and v has capacity minimum+1. It can report such a cut, if it exists, in {O}(n) time, which is worst-case optimal. 2) Dual Edge Sensitivity Oracle: We design the following pair of data structures. (a) There is an {O}(n(n-|S|+1)) space data structure that, after the failure or insertion of any pair of edges in G, can report the capacity of Steiner mincut in {O}(1) time and a Steiner mincut in {O}(n) time, which is worst-case optimal. (b) If we are interested in reporting only the capacity of Steiner mincut, there is a more compact data structure that occupies {O}((n-|S|)²+n) space and can report the capacity of Steiner mincut in {O}(1) time after the failure or insertion of any pair of edges. 3) Lower Bound for Sensitivity Oracle: For undirected multi-graphs, for any Steiner set S ⊆ V, any data structure that, after the failure or insertion of any pair of edges, can report the capacity of Steiner mincut must occupy Ω((n-|S|)²) bits of space in the worst case, irrespective of the query time. To arrive at our results, we provide several techniques, especially a generalization of the 3-Star Lemma given by Dinitz and Vainshtein [SICOMP 2000], which is of independent interest. Our results achieve the same space and time bounds of the existing results for the two extreme scenarios of Steiner cuts - global and (s,t)-cut. In addition, the space occupied by our data structures in (1) and (2) reduces as |S| tends to n. Also, they occupy subquadratic space if |S| is close to n.

Cite as

Koustav Bhanja. Minimum+1 Steiner Cut and Dual Edge Sensitivity Oracle: Bridging Gap between Global and (s,t)-cut. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 27:1-27:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bhanja:LIPIcs.ICALP.2025.27,
  author =	{Bhanja, Koustav},
  title =	{{Minimum+1 Steiner Cut and Dual Edge Sensitivity Oracle: Bridging Gap between Global and (s,t)-cut}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{27:1--27:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.27},
  URN =		{urn:nbn:de:0030-drops-234040},
  doi =		{10.4230/LIPIcs.ICALP.2025.27},
  annote =	{Keywords: cut, mincut, minimum+1, steiner, edge fault, sensitivity oracle, dual edges}
}
Document
Track A: Algorithms, Complexity and Games
Undirected 3-Fault Replacement Path in Nearly Cubic Time

Authors: Shucheng Chi, Ran Duan, Benyu Wang, and Tianle Xie

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
Given a graph G = (V,E) (n = |V|, m = |E|) and two vertices s,t ∈ V, the f-fault replacement path (fFRP) problem computes for every set F of at most f edges, the distance from s to t when edges in F fail. A recent result shows that 2FRP in directed graphs can be solved in Õ(n³) time [Vassilevska Williams, Woldeghebriel, Xu 2022]. In this paper, we show a 3FRP algorithm in deterministic Õ(n³) time for undirected weighted graphs, which almost matches the size of the output. This implies that fFRP in undirected graphs can be solved in nearly optimal Õ(n^f) time for all f ≥ 3. To construct our 3FRP algorithm, we introduce an incremental distance sensitivity oracle (DSO) for undirected graphs with Õ(n²) worst-case update time, while preprocessing time, space, and query time are still Õ(n³), Õ(n²) and Õ(1), respectively, which match the static DSO [Bernstein and Karger 2009]. Here in a DSO, we can preprocess a graph so that the distance between any pair of vertices given any failed edge can be answered efficiently. From the recent result in [Peng and Rubinstein 2023], we can obtain an offline dynamic DSO from the incremental worst-case DSO, which makes the construction of our 3FRP algorithm more convenient. By the offline dynamic DSO, we can also construct a 2-fault single-source replacement path (2-fault SSRP) algorithm in Õ(n³) time, that is, from a given vertex s, we want to find the distance to any vertex t when any pair of edges fail. Thus the Õ(n³) time complexity for 2-fault SSRP is also nearly optimal. Now we know that in undirected graphs 1FRP can be solved in Õ(m) time [Nardelli, Proietti, Widmayer 2001], and 2FRP and 3FRP in undirected graphs can be solved in Õ(n³) time. In this paper, we also show that a truly subcubic algorithm for 2FRP in undirected weighted graphs does not exist under APSP hypothesis.

Cite as

Shucheng Chi, Ran Duan, Benyu Wang, and Tianle Xie. Undirected 3-Fault Replacement Path in Nearly Cubic Time. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 57:1-57:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{chi_et_al:LIPIcs.ICALP.2025.57,
  author =	{Chi, Shucheng and Duan, Ran and Wang, Benyu and Xie, Tianle},
  title =	{{Undirected 3-Fault Replacement Path in Nearly Cubic Time}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{57:1--57:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.57},
  URN =		{urn:nbn:de:0030-drops-234346},
  doi =		{10.4230/LIPIcs.ICALP.2025.57},
  annote =	{Keywords: Graph Algorithm, Shortest Path, Replacement Path}
}
Document
Track A: Algorithms, Complexity and Games
Incremental Approximate Maximum Flow via Residual Graph Sparsification

Authors: Gramoz Goranci, Monika Henzinger, Harald Räcke, and A. R. Sricharan

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
We give an algorithm that, with high probability, maintains a (1-ε)-approximate s-t maximum flow in undirected, uncapacitated n-vertex graphs undergoing m edge insertions in Õ(m+ n F^*/ε) total update time, where F^{*} is the maximum flow on the final graph. This is the first algorithm to achieve polylogarithmic amortized update time for dense graphs (m = Ω(n²)), and more generally, for graphs where F^* = Õ(m/n). At the heart of our incremental algorithm is the residual graph sparsification technique of Karger and Levine [SICOMP '15], originally designed for computing exact maximum flows in the static setting. Our main contributions are (i) showing how to maintain such sparsifiers for approximate maximum flows in the incremental setting and (ii) generalizing the cut sparsification framework of Fung et al. [SICOMP '19] from undirected graphs to balanced directed graphs.

Cite as

Gramoz Goranci, Monika Henzinger, Harald Räcke, and A. R. Sricharan. Incremental Approximate Maximum Flow via Residual Graph Sparsification. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 91:1-91:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{goranci_et_al:LIPIcs.ICALP.2025.91,
  author =	{Goranci, Gramoz and Henzinger, Monika and R\"{a}cke, Harald and Sricharan, A. R.},
  title =	{{Incremental Approximate Maximum Flow via Residual Graph Sparsification}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{91:1--91:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.91},
  URN =		{urn:nbn:de:0030-drops-234686},
  doi =		{10.4230/LIPIcs.ICALP.2025.91},
  annote =	{Keywords: incremental flow, sparsification, approximate flow}
}
Document
On b-Matching and Fully-Dynamic Maximum k-Edge Coloring

Authors: Antoine El-Hayek, Kathrin Hanauer, and Monika Henzinger

Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)


Abstract
Given a graph G that undergoes a sequence of edge insertions and deletions, we study the Maximum k-Edge Coloring problem (MkEC): Having access to k different colors, color as many edges of G as possible such that no two adjacent edges share the same color. While this problem is different from simply maintaining a b-matching with b = k, the two problems are related. However, maximum b-matching can be solved efficiently in the static setting, whereas MkEC is NP-hard and even APX-hard for k ≥ 2. We present new results on both problems: For b-matching, we show a new integrality gap result and we adapt Wajc’s matching sparsification scheme [David Wajc, 2020] for the case where b is a constant. Using these as basis, we give three new algorithms for the dynamic MkEC problem: Our MatchO algorithm builds on the dynamic (2+ε)-approximation algorithm of Bhattacharya, Gupta, and Mohan [Sayan Bhattacharya et al., 2017] for b-matching and achieves a (2+ε)(k+1)/k-approximation in O(poly(log n, ε^-1)) update time against an oblivious adversary. Our MatchA algorithm builds on the dynamic (7+ε)-approximation algorithm by Bhattacharya, Henzinger, and Italiano [Sayan Bhattacharya et al., 2015] for fractional b-matching and achieves a (7+ε)(3k+3)/(3k-1)-approximation in O(poly(log n, ε^-1)) update time against an adaptive adversary. Moreover, our reductions use the dynamic b-matching algorithm as a black box, so any future improvement in the approximation ratio for dynamic b-matching will automatically translate into a better approximation ratio for our algorithms. Finally, we present a greedy algorithm with O(Δ+k) update time, which guarantees a 2.16 approximation factor.

Cite as

Antoine El-Hayek, Kathrin Hanauer, and Monika Henzinger. On b-Matching and Fully-Dynamic Maximum k-Edge Coloring. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 4:1-4:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{elhayek_et_al:LIPIcs.SAND.2025.4,
  author =	{El-Hayek, Antoine and Hanauer, Kathrin and Henzinger, Monika},
  title =	{{On b-Matching and Fully-Dynamic Maximum k-Edge Coloring}},
  booktitle =	{4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
  pages =	{4:1--4:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-368-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{330},
  editor =	{Meeks, Kitty and Scheideler, Christian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.4},
  URN =		{urn:nbn:de:0030-drops-230571},
  doi =		{10.4230/LIPIcs.SAND.2025.4},
  annote =	{Keywords: dynamic algorithm, graph algorithm, matching, b-matching, edge coloring}
}
Document
Generalized Inner Product Estimation with Limited Quantum Communication

Authors: Srinivasan Arunachalam and Louis Schatzki

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)


Abstract
In this work, we consider the fundamental task of distributed inner product estimation when allowed limited communication. Suppose Alice and Bob are given k copies of an unknown n-qubit quantum state |ψ⟩,|ϕ⟩ respectively, are allowed to send q qubits to one another, and the task is to estimate |⟨ψ|ϕ⟩|² up to constant additive error. We show that k = Θ(√{2^{n-q}}) copies are essentially necessary and sufficient for this task (extending the work of Anshu, Landau and Liu (STOC'22) who considered the case when q = 0). Additionally, we also consider the task when the goal of the players is to estimate |⟨ψ|M|ϕ⟩|², for arbitrary Hermitian M. For this task we show that certain norms on M determine the sample complexity of estimating |⟨ψ|M|ϕ⟩|² when using only classical communication.

Cite as

Srinivasan Arunachalam and Louis Schatzki. Generalized Inner Product Estimation with Limited Quantum Communication. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 11:1-11:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{arunachalam_et_al:LIPIcs.STACS.2025.11,
  author =	{Arunachalam, Srinivasan and Schatzki, Louis},
  title =	{{Generalized Inner Product Estimation with Limited Quantum Communication}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{11:1--11:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.11},
  URN =		{urn:nbn:de:0030-drops-228366},
  doi =		{10.4230/LIPIcs.STACS.2025.11},
  annote =	{Keywords: Quantum property testing, Quantum Distributed Algorithms}
}
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