18 Search Results for "Fowler, John"


Document
Cycle Basis Algorithms for Reducing Maximum Edge Participation

Authors: Fan Wang and Sandy Irani

Published in: LIPIcs, Volume 371, 24th International Symposium on Experimental Algorithms (SEA 2026)


Abstract
A cycle basis of a graph is a minimal set of cycles from which every cycle in the graph can be generated by symmetric difference. We study the problem of constructing cycle bases of graphs with low maximum edge participation, defined as the maximum number of cycles in the basis that share any single edge. This quantity, though less studied than total weight or length, plays a critical role in quantum fault tolerance, as it directly impacts the overhead of lattice surgery procedures used to implement an almost universal quantum gate set. Building on a recursive algorithm by Freedman and Hastings, we introduce a family of load-aware heuristics that adaptively select vertices and edges to minimize edge participation throughout the cycle basis construction. Our approach improves empirical performance on random regular graphs and on graphs derived from small quantum codes. We further analyze a simplified balls-into-bins process to establish lower bounds on edge participation. While the model differs from the cycle basis algorithm on real graphs, it captures what can be proven for our heuristics without using more complex graph theoretic properties related to the distribution of cycles in the graph. Our analysis suggests that the maximum load of all of our heuristics will be Ω(log² n). Our results indicate that careful cycle basis construction can yield significant practical benefits in the design of fault-tolerant quantum systems. Maximum edge participation has been studied in the graph theory literature under the name basis number, which is the minimum possible maximum edge participation over all cycle bases in a graph.

Cite as

Fan Wang and Sandy Irani. Cycle Basis Algorithms for Reducing Maximum Edge Participation. In 24th International Symposium on Experimental Algorithms (SEA 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 371, pp. 27:1-27:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{wang_et_al:LIPIcs.SEA.2026.27,
  author =	{Wang, Fan and Irani, Sandy},
  title =	{{Cycle Basis Algorithms for Reducing Maximum Edge Participation}},
  booktitle =	{24th International Symposium on Experimental Algorithms (SEA 2026)},
  pages =	{27:1--27:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-422-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{371},
  editor =	{Aum\"{u}ller, Martin and Finocchi, Irene},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2026.27},
  URN =		{urn:nbn:de:0030-drops-260311},
  doi =		{10.4230/LIPIcs.SEA.2026.27},
  annote =	{Keywords: Graph algorithms, Cycle Basis, Quantum fault tolerance}
}
Document
Privacy, Prediction, and Allocation

Authors: Ben Jacobsen and Nitin Kohli

Published in: LIPIcs, Volume 368, 7th Symposium on Foundations of Responsible Computing (FORC 2026)


Abstract
Algorithmic predictions are increasingly used to inform the allocation of scarce resources. The promise of these methods is that, through machine learning, they can better identify the people who would benefit most from interventions. Recently, however, several works have called this assumption into question by demonstrating the existence of settings where simple, unit-level allocation strategies can meet or even exceed the performance of those based on individual-level targeting. Separately, other works have objected to individual-level targeting on privacy grounds, leading to an unusual situation where a single solution, unit-level targeting, is recommended for reasons of both privacy and utility. Motivated by the desire to fully understand the interplay of privacy and targeting levels, we initiate the study of aid allocation systems that satisfy differential privacy, synthesizing existing works on private optimization with the economic models of aid allocation used in the non-private literature. To this end, we investigate private variants of both individual and unit-level allocation strategies in both stochastic and distribution-free settings under a range of constraints on data availability. Through this analysis, we provide clean, interpretable bounds characterizing the tradeoffs between privacy, efficiency, and targeting precision in allocation.

Cite as

Ben Jacobsen and Nitin Kohli. Privacy, Prediction, and Allocation. In 7th Symposium on Foundations of Responsible Computing (FORC 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 368, pp. 20:1-20:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{jacobsen_et_al:LIPIcs.FORC.2026.20,
  author =	{Jacobsen, Ben and Kohli, Nitin},
  title =	{{Privacy, Prediction, and Allocation}},
  booktitle =	{7th Symposium on Foundations of Responsible Computing (FORC 2026)},
  pages =	{20:1--20:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-419-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{368},
  editor =	{Lin, Huijia (Rachel)},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FORC.2026.20},
  URN =		{urn:nbn:de:0030-drops-259935},
  doi =		{10.4230/LIPIcs.FORC.2026.20},
  annote =	{Keywords: Differential privacy, fair allocation, limits of prediction}
}
Document
Random Unitaries in Constant (Quantum) Time

Authors: Ben Foxman, Natalie Parham, Francisca Vasconcelos, and Henry Yuen

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
Random unitaries are a central object of study in quantum information, with applications to quantum computation, quantum many-body physics, and quantum cryptography. Recent work has constructed unitary designs and pseudorandom unitaries (PRUs) using Θ(log log n)-depth unitary circuits with two-qubit gates. In this work, we show that unitary designs and PRUs can be efficiently constructed in several well-studied models of constant-time quantum computation (i.e., the time complexity on the quantum computer is independent of the system size). These models are constant-depth circuits augmented with certain nonlocal operations, such as (a) many-qubit TOFFOLI gates, (b) many-qubit FANOUT gates, or (c) mid-circuit measurements with classical feedforward control. Recent advances in quantum computing hardware suggest experimental feasibility of these models in the near future. Our results demonstrate that unitary designs and PRUs can be constructed in much weaker circuit models than previously thought. Furthermore, our construction of PRUs in constant-depth with many-qubit TOFFOLI gates shows that, under cryptographic assumptions, there is no polynomial-time learning algorithm for the circuit class QAC⁰. Finally, our results suggest a new approach towards proving that PARITY is not computable in QAC⁰, a long-standing question in quantum complexity theory.

Cite as

Ben Foxman, Natalie Parham, Francisca Vasconcelos, and Henry Yuen. Random Unitaries in Constant (Quantum) Time. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 61:1-61:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{foxman_et_al:LIPIcs.ITCS.2026.61,
  author =	{Foxman, Ben and Parham, Natalie and Vasconcelos, Francisca and Yuen, Henry},
  title =	{{Random Unitaries in Constant (Quantum) Time}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{61:1--61:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.61},
  URN =		{urn:nbn:de:0030-drops-253481},
  doi =		{10.4230/LIPIcs.ITCS.2026.61},
  annote =	{Keywords: Quantum Information, Pseudorandomness, Circuit Complexity}
}
Document
Mobile Byzantine Agreement in a Trusted World

Authors: Bo Pan and Maria Potop-Butucaru

Published in: LIPIcs, Volume 361, 29th International Conference on Principles of Distributed Systems (OPODIS 2025)


Abstract
In this paper, we address the Byzantine Agreement problem in synchronous systems where Byzantine agents can move from process to process, corrupting their host. We focus on two representative models: Garay’s and Buhrman’s models. In Garay’s model, when a process has been left by the Byzantine agent, it enters a cured state, is aware of its condition, and can remain silent for a round to prevent the dissemination of incorrect information. In Buhrman’s model, a Byzantine agent moves together with the message. It has been shown that solving Byzantine Agreement requires at least 4t + 1 processes in Garay’s model, and at least 3t + 1 in Buhrman’s model. In this paper, we aim to increase the tolerance to mobile Byzantine agents by integrating a trusted counter abstraction into both models. This abstraction prevents nodes from equivocating. In the new models, we prove that at least 3t+1, respectively 2t+1 processors are needed to tolerate t mobile Byzantine agents. Furthermore, we propose novel Mobile Byzantine Agreement algorithms that match these new lower bounds for both Garay’s and Buhrman’s models, achieving agreement in 𝒪(n) synchronous rounds.

Cite as

Bo Pan and Maria Potop-Butucaru. Mobile Byzantine Agreement in a Trusted World. In 29th International Conference on Principles of Distributed Systems (OPODIS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 361, pp. 7:1-7:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{pan_et_al:LIPIcs.OPODIS.2025.7,
  author =	{Pan, Bo and Potop-Butucaru, Maria},
  title =	{{Mobile Byzantine Agreement in a Trusted World}},
  booktitle =	{29th International Conference on Principles of Distributed Systems (OPODIS 2025)},
  pages =	{7:1--7:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-409-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{361},
  editor =	{Arusoaie, Andrei and Onica, Emanuel and Spear, Michael and Tucci-Piergiovanni, Sara},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.OPODIS.2025.7},
  URN =		{urn:nbn:de:0030-drops-251809},
  doi =		{10.4230/LIPIcs.OPODIS.2025.7},
  annote =	{Keywords: Byzantine Agreement, Mobile Faults, Trusted Abstractions}
}
Document
Research
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3


Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.

Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
Unreliability in Practical Subclasses of Communicating Systems

Authors: Amrita Suresh and Nobuko Yoshida

Published in: LIPIcs, Volume 360, 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)


Abstract
Systems of communicating automata are prominent models for peer-to-peer message-passing over unbounded channels, but in the general scenario, most verification properties are undecidable. To address this issue, two decidable subclasses, Realisable with Synchronous Communication (RSC) and k-Multiparty Compatibility (k-MC), were proposed in the literature, with corresponding verification tools developed and applied in practice. Unfortunately, both RSC and k-MC are not resilient under failures: (1) their decidability relies on the assumption of perfect channels and (2) most standard protocols do not satisfy RSC or k-MC under failures. To address these limitations, this paper studies the resilience of RSC and k-MC under two distinct failure models: interference and crash-stop failures. For interference, we relax the conditions of RSC and k-MC and prove that the inclusions of these relaxed properties remain decidable under interference, preserving their known complexity bounds. We then propose a novel crash-handling communicating system that captures wider behaviours than existing multiparty session types (MPST) with crash-stop failures. We study a translation of MPST with crash-stop failures into this system integrating RSC and k-MC properties, and establish their decidability results. Finally, by verifying representative protocols from the literature using RSC and k-MC tools extended to interferences, we evaluate the relaxed systems and demonstrate their resilience.

Cite as

Amrita Suresh and Nobuko Yoshida. Unreliability in Practical Subclasses of Communicating Systems. In 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 360, pp. 52:1-52:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{suresh_et_al:LIPIcs.FSTTCS.2025.52,
  author =	{Suresh, Amrita and Yoshida, Nobuko},
  title =	{{Unreliability in Practical Subclasses of Communicating Systems}},
  booktitle =	{45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)},
  pages =	{52:1--52:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-406-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{360},
  editor =	{Aiswarya, C. and Mehta, Ruta and Roy, Subhajit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2025.52},
  URN =		{urn:nbn:de:0030-drops-251312},
  doi =		{10.4230/LIPIcs.FSTTCS.2025.52},
  annote =	{Keywords: Communicating automata, lossy channel, corruption, out of order, session types, crash-stop failure}
}
Document
Uniformity Testing When You Have the Source Code

Authors: Clément L. Canonne, Robin Kothari, and Ryan O'Donnell

Published in: LIPIcs, Volume 350, 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)


Abstract
We study quantum algorithms for verifying properties of the output probability distribution of a classical or quantum circuit, given access to the source code that generates the distribution. We consider the basic task of uniformity testing, which is to decide if the output distribution is uniform on [d] or ε-far from uniform in total variation distance. More generally, we consider identity testing, which is the task of deciding if the output distribution equals a known hypothesis distribution, or is ε-far from it. For both problems, the previous best known upper bound was O(min{d^{1/3}/ε²,d^{1/2}/ε}). Here we improve the upper bound to O(min{d^{1/3}/ε^{4/3}, d^{1/2}/ε}), which we conjecture is optimal.

Cite as

Clément L. Canonne, Robin Kothari, and Ryan O'Donnell. Uniformity Testing When You Have the Source Code. In 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 350, pp. 7:1-7:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{canonne_et_al:LIPIcs.TQC.2025.7,
  author =	{Canonne, Cl\'{e}ment L. and Kothari, Robin and O'Donnell, Ryan},
  title =	{{Uniformity Testing When You Have the Source Code}},
  booktitle =	{20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)},
  pages =	{7:1--7:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-392-8},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{350},
  editor =	{Fefferman, Bill},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.TQC.2025.7},
  URN =		{urn:nbn:de:0030-drops-240561},
  doi =		{10.4230/LIPIcs.TQC.2025.7},
  annote =	{Keywords: distribution testing, uniformity testing, quantum algorithms}
}
Document
Mutational Signature Refitting on Sparse Pan-Cancer Data

Authors: Gal Gilad, Teresa M. Przytycka, and Roded Sharan

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)


Abstract
Mutational processes shape cancer genomes, leaving characteristic marks that are termed signatures. The level of activity of each such process, or its signature exposure, provides important information on the disease, improving patient stratification and the prediction of drug response. Thus, there is growing interest in developing refitting methods that decipher those exposures. Previous work in this domain was unsupervised in nature, employing algebraic decomposition and probabilistic inference methods. Here we provide a supervised approach to the problem of signature refitting and show its superiority over current methods. Our method, SuRe, leverages a neural network model to capture correlations between signature exposures in real data. We show that SuRe outperforms previous methods on sparse mutation data from tumor type specific data sets, as well as pan-cancer data sets, with an increasing advantage as the data become sparser. We further demonstrate its utility in clinical settings.

Cite as

Gal Gilad, Teresa M. Przytycka, and Roded Sharan. Mutational Signature Refitting on Sparse Pan-Cancer Data. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 11:1-11:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{gilad_et_al:LIPIcs.WABI.2025.11,
  author =	{Gilad, Gal and Przytycka, Teresa M. and Sharan, Roded},
  title =	{{Mutational Signature Refitting on Sparse Pan-Cancer Data}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{11:1--11:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.11},
  URN =		{urn:nbn:de:0030-drops-239374},
  doi =		{10.4230/LIPIcs.WABI.2025.11},
  annote =	{Keywords: mutational signatures, signature refitting, cancer genomics, genomic data analysis, somatic mutations}
}
Document
Reducing Quantum Circuit Synthesis to #SAT

Authors: Dekel Zak, Jingyi Mei, Jean-Marie Lagniez, and Alfons Laarman

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)


Abstract
Quantum circuit synthesis is the task of decomposing a given quantum operator into a sequence of elementary quantum gates. Since the finite target gate set cannot exactly implement any given operator, approximation is often necessary. Model counting, or #SAT, has recently been demonstrated as a promising new approach for tackling core problems in quantum circuit analysis. In this work, we show for the first time that the universal quantum circuit synthesis problem can be reduced to maximum model counting. We formulate a #SAT encoding for exact and approximate depth-optimal quantum circuit synthesis into the Clifford+T gate set. We evaluate our method with an open-source implementation that uses the maximum model counter d4Max as a backend. For this purpose, we extended d4Max with support for complex and negative weights to represent amplitudes. Experimental results show that existing classical tools have potential for the quantum circuit synthesis problem.

Cite as

Dekel Zak, Jingyi Mei, Jean-Marie Lagniez, and Alfons Laarman. Reducing Quantum Circuit Synthesis to #SAT. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 38:1-38:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{zak_et_al:LIPIcs.CP.2025.38,
  author =	{Zak, Dekel and Mei, Jingyi and Lagniez, Jean-Marie and Laarman, Alfons},
  title =	{{Reducing Quantum Circuit Synthesis to #SAT}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{38:1--38:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.38},
  URN =		{urn:nbn:de:0030-drops-238997},
  doi =		{10.4230/LIPIcs.CP.2025.38},
  annote =	{Keywords: Maximum weighted model counting, quantum circuit synthesis}
}
Document
Algorithms for Computing Very Large BWTs: a Short Survey

Authors: Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)


Abstract
The Burrows-Wheeler Transform (BWT) is a fundamental string transformation that, although initially introduced for data compression, has been extensively utilized across various domains, including text indexing and pattern matching within large datasets. Although the BWT construction is linear, the constants make the task impractical for large datasets, and as highlighted by Ferragina et al. [Paolo Ferragina et al., 2012], "to use it, one must first build it!". Thus, the construction of the BWT remains a significant challenge. For these reasons, during the past three decades there has been a succession of new algorithms for its construction using techniques that work in external memory or that use text compression. In this survey, we revise some of the most important advancements and tools presented in the past years for computing large BWTs exploiting external memory or text compression approaches without using additional information about the data.

Cite as

Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone. Algorithms for Computing Very Large BWTs: a Short Survey. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 7:1-7:28, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{diazdominguez_et_al:OASIcs.Manzini.7,
  author =	{D{\'\i}az-Dom{\'\i}nguez, Diego and Egidi, Lavinia and Guerrini, Veronica and Louza, Felipe A. and Rosone, Giovanna},
  title =	{{Algorithms for Computing Very Large BWTs: a Short Survey}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{7:1--7:28},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.7},
  URN =		{urn:nbn:de:0030-drops-239151},
  doi =		{10.4230/OASIcs.Manzini.7},
  annote =	{Keywords: Burrows-Wheeler transform, Extended Burrows-Wheeler transform, external memory, text compression, longest common prefix}
}
Document
A DSL for Swarm Intelligence Algorithms

Authors: Kevin Martins and Rui Mendes

Published in: OASIcs, Volume 135, 14th Symposium on Languages, Applications and Technologies (SLATE 2025)


Abstract
We propose a domain-specific language to simplify the expression of Swarm Intelligence algorithms. These algorithms are typically introduced through metaphors, requiring practitioners to manually translate them into low-level implementations.This process can obscure intent and hinder reproducibility. The proposed DSL bridges this gap by capturing algorithmic behavior at a higher level of abstraction. We demonstrate its expressiveness in a few lines of code and evaluate its feasibility through a reference implementation. A discussion is presented that includes empirical comparisons with traditional implementations and future directions of the proposed DSL.

Cite as

Kevin Martins and Rui Mendes. A DSL for Swarm Intelligence Algorithms. In 14th Symposium on Languages, Applications and Technologies (SLATE 2025). Open Access Series in Informatics (OASIcs), Volume 135, pp. 2:1-2:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{martins_et_al:OASIcs.SLATE.2025.2,
  author =	{Martins, Kevin and Mendes, Rui},
  title =	{{A DSL for Swarm Intelligence Algorithms}},
  booktitle =	{14th Symposium on Languages, Applications and Technologies (SLATE 2025)},
  pages =	{2:1--2:17},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-387-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{135},
  editor =	{Baptista, Jorge and Barateiro, Jos\'{e}},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SLATE.2025.2},
  URN =		{urn:nbn:de:0030-drops-236826},
  doi =		{10.4230/OASIcs.SLATE.2025.2},
  annote =	{Keywords: Domain Specific Languages, Swarm Intelligence, Global Optimization}
}
Document
Quantum Data Sketches

Authors: Qin Zhang and Mohsen Heidari

Published in: LIPIcs, Volume 328, 28th International Conference on Database Theory (ICDT 2025)


Abstract
Recent advancements in quantum technologies, particularly in quantum sensing and simulation, have facilitated the generation and analysis of inherently quantum data. This progress underscores the necessity for developing efficient and scalable quantum data management strategies. This goal faces immense challenges due to the exponential dimensionality of quantum data and its unique quantum properties such as no-cloning and measurement stochasticity. Specifically, classical storage and manipulation of an arbitrary n-qubit quantum state requires exponential space and time. Hence, there is a critical need to revisit foundational data management concepts and algorithms for quantum data. In this paper, we propose succinct quantum data sketches to support basic database operations such as search and selection. We view our work as an initial step towards the development of quantum data management model, opening up many possibilities for future research in this direction.

Cite as

Qin Zhang and Mohsen Heidari. Quantum Data Sketches. In 28th International Conference on Database Theory (ICDT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 328, pp. 16:1-16:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{zhang_et_al:LIPIcs.ICDT.2025.16,
  author =	{Zhang, Qin and Heidari, Mohsen},
  title =	{{Quantum Data Sketches}},
  booktitle =	{28th International Conference on Database Theory (ICDT 2025)},
  pages =	{16:1--16:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-364-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{328},
  editor =	{Roy, Sudeepa and Kara, Ahmet},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICDT.2025.16},
  URN =		{urn:nbn:de:0030-drops-229570},
  doi =		{10.4230/LIPIcs.ICDT.2025.16},
  annote =	{Keywords: quantum data representation, data sketching, query execution}
}
Document
Formulations and Constructions of Remote State Preparation with Verifiability, with Applications

Authors: Jiayu Zhang

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)


Abstract
Remote state preparation with verifiability (RSPV) is an important quantum cryptographic primitive [Alexandru Gheorghiu and Thomas Vidick, 2019; Jiayu Zhang, 2022]. In this primitive, a client would like to prepare a quantum state (sampled or chosen from a state family) on the server side, such that ideally the client knows its full description, while the server holds and only holds the state itself. In this work we make several contributions on its formulations, constructions and applications. In more detail: - We first work on the definitions and abstract properties of the RSPV problem. We select and compare different variants of definitions [Bennett et al., 2001; Alexandru Gheorghiu and Thomas Vidick, 2019; Jiayu Zhang, 2022; Alexandru Gheorghiu et al., 2022], and study their basic properties (like composability and amplification). - We also study a closely related question of how to certify the server’s operations (instead of solely the states). We introduce a new notion named remote operator application with verifiability (ROAV). We compare this notion with related existing definitions [Summers and Werner, 1987; Dominic Mayers and Andrew Chi-Chih Yao, 2004; Zhengfeng Ji et al., 2021; Tony Metger and Thomas Vidick, 2021; Anand Natarajan and Tina Zhang, 2023], study its abstract properties and leave its concrete constructions for further works. - Building on the abstract properties and existing results [Zvika Brakerski et al., 2023], we construct a series of new RSPV protocols. Our constructions not only simplify existing results [Alexandru Gheorghiu and Thomas Vidick, 2019] but also cover new state families, for example, states in the form of 1/√2 (|0⟩ + |x_0⟩ + |1⟩ |x_1⟩). All these constructions rely only on the existence of weak NTCF [Zvika Brakerski et al., 2020; Navid Alamati et al., 2022], without additional requirements like the adaptive hardcore bit property [Zvika Brakerski et al., 2018; Navid Alamati et al., 2022]. - As a further application, we show that the classical verification of quantum computations (CVQC) problem [Dorit Aharonov et al., 2010; Urmila Mahadev, 2018] could be constructed from assumptions on group actions [Navid Alamati et al., 2020]. This is achieved by combining our results on RSPV with group-action-based instantiation of weak NTCF [Navid Alamati et al., 2022], and then with the quantum-gadget-assisted quantum verification protocol [Ferracin et al., 2018].

Cite as

Jiayu Zhang. Formulations and Constructions of Remote State Preparation with Verifiability, with Applications. In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 96:1-96:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{zhang:LIPIcs.ITCS.2025.96,
  author =	{Zhang, Jiayu},
  title =	{{Formulations and Constructions of Remote State Preparation with Verifiability, with Applications}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{96:1--96:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.96},
  URN =		{urn:nbn:de:0030-drops-227245},
  doi =		{10.4230/LIPIcs.ITCS.2025.96},
  annote =	{Keywords: Quantum Cryptography, Remote State Preparation, Self-testing, Verification of Quantum Computations}
}
Document
Decision-Making Techniques for Smart Semiconductor Manufacturing (Dagstuhl Seminar 23362)

Authors: Hans Ehm, John Fowler, Lars Mönch, and Daniel Schorn

Published in: Dagstuhl Reports, Volume 13, Issue 9 (2024)


Abstract
In September 2023 the Dagstuhl Seminar 23362 explored the needs of the semiconductor industry for novel decision-making techniques and the related information systems to empower flexible decisions for smart production. The seminar participants also spent time identifying requirements for a simulation testbed which allows for assessing smart planning and control decisions in the semiconductor industry. The Executive Summary describes the process of the seminar and discusses key findings and areas for future research regarding these topics. Abstracts of presentations given during the seminar and the output of breakout sessions are collected in further sections.

Cite as

Hans Ehm, John Fowler, Lars Mönch, and Daniel Schorn. Decision-Making Techniques for Smart Semiconductor Manufacturing (Dagstuhl Seminar 23362). In Dagstuhl Reports, Volume 13, Issue 9, pp. 69-102, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)


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@Article{ehm_et_al:DagRep.13.9.69,
  author =	{Ehm, Hans and Fowler, John and M\"{o}nch, Lars and Schorn, Daniel},
  title =	{{Decision-Making Techniques for Smart Semiconductor Manufacturing (Dagstuhl Seminar 23362)}},
  pages =	{69--102},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2024},
  volume =	{13},
  number =	{9},
  editor =	{Ehm, Hans and Fowler, John and M\"{o}nch, Lars and Schorn, Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagRep.13.9.69},
  URN =		{urn:nbn:de:0030-drops-198216},
  doi =		{10.4230/DagRep.13.9.69},
  annote =	{Keywords: analytics, modeling, semiconductor manufacturing, simulation, smart manufacturing}
}
Document
Decision-Making Modeling and Solutions for Smart Semiconductor Manufacturing (Dagstuhl Seminar 20452)

Authors: Chen-Fu Chien, Hans Ehm, John W. Fowler, and Lars Mönch

Published in: Dagstuhl Reports, Volume 10, Issue 5 (2021)


Abstract
In November 2020 the Dagstuhl Seminar 20452 explored the needs of the semiconductor industry for making smart semiconductor manufacturing decisions and the information systems to empower flexible decisions for smart production. The seminar participants also spent time identifying the core elements for a simulation testbed which allows for assessing smart planning and control decisions in the semiconductor industry. This Executive Summary describes the process of the seminar and discusses key findings and areas for future research regarding these topics. Abstracts of presentations given during the seminar and the output of breakout sessions are collected in appendices.

Cite as

Chen-Fu Chien, Hans Ehm, John W. Fowler, and Lars Mönch. Decision-Making Modeling and Solutions for Smart Semiconductor Manufacturing (Dagstuhl Seminar 20452). In Dagstuhl Reports, Volume 10, Issue 5, pp. 1-18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)


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@Article{chien_et_al:DagRep.10.5.1,
  author =	{Chien, Chen-Fu and Ehm, Hans and Fowler, John W. and M\"{o}nch, Lars},
  title =	{{Decision-Making Modeling and Solutions for Smart Semiconductor Manufacturing (Dagstuhl Seminar 20452)}},
  pages =	{1--18},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2021},
  volume =	{10},
  number =	{5},
  editor =	{Chien, Chen-Fu and Ehm, Hans and Fowler, John W. and M\"{o}nch, Lars},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagRep.10.5.1},
  URN =		{urn:nbn:de:0030-drops-137410},
  doi =		{10.4230/DagRep.10.5.1},
  annote =	{Keywords: Modeling, Simulation, Smart Manufacturing, Analytics, Semiconductor Manufacturing}
}
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