44 Search Results for "Mount, David M."


Document
Lower Bounds on Tree Covers

Authors: Yu Chen, Zihan Tan, and Hangyu Xu

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
Given an n-point metric space (X,d_X), a tree cover 𝒯 is a set of |𝒯| = k trees on X such that every pair of vertices in X has a low-distortion path in one of the trees in 𝒯. Tree covers have been playing a crucial role in graph algorithms for decades, and the research focus is the construction of tree covers with small size k and distortion. When k = 1, the best distortion is known to be Θ(n). For a constant k ≥ 2, the best distortion upper bound is Õ(n^{1/k}) and the strongest lower bound is Ω(log_k n), leaving a gap to be closed. In this paper, we improve the lower bound to Ω(n^{1/(2^{k-1)}}). Our proof is a novel analysis on a structurally simple grid-like graph, which utilizes some combinatorial fixed-point theorems. We believe that they will prove useful for analyzing other tree-like data structures as well.

Cite as

Yu Chen, Zihan Tan, and Hangyu Xu. Lower Bounds on Tree Covers. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 38:1-38:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{chen_et_al:LIPIcs.ITCS.2026.38,
  author =	{Chen, Yu and Tan, Zihan and Xu, Hangyu},
  title =	{{Lower Bounds on Tree Covers}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{38:1--38:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.38},
  URN =		{urn:nbn:de:0030-drops-253254},
  doi =		{10.4230/LIPIcs.ITCS.2026.38},
  annote =	{Keywords: Tree Covers, Combinatorial Fixed-Point Theorems}
}
Document
Clustering in Varying Metrics

Authors: Deeparnab Chakrabarty, Jonathan Conroy, and Ankita Sarkar

Published in: LIPIcs, Volume 360, 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)


Abstract
We introduce the aggregated clustering problem, where one is given T instances of a center-based clustering task over the same n points, but under different metrics. The goal is to open k centers to minimize an aggregate of the clustering costs - e.g., the average or maximum - where the cost is measured via k-center/median/means objectives. More generally, we minimize a norm Ψ over the T cost values. We show that for T ≥ 3, the problem is inapproximable to any finite factor in polynomial time. For T = 2, we give constant-factor approximations. We also show W[2]-hardness when parameterized by k, but obtain f(k,T)poly(n)-time 3-approximations when parameterized by both k and T. When the metrics have structure, we obtain efficient parameterized approximation schemes (EPAS). If all T metrics have bounded ε-scatter dimension, we achieve a (1+ε)-approximation in f(k,T,ε)poly(n) time. If the metrics are induced by edge weights on a common graph G of bounded treewidth tw, and Ψ is the sum function, we get an EPAS in f(T,ε,tw)poly(n,k) time. Conversely, unless (randomized) ETH is false, any finite factor approximation is impossible if parametrized by only T, even when the treewidth is tw = Ω(polylog n).

Cite as

Deeparnab Chakrabarty, Jonathan Conroy, and Ankita Sarkar. Clustering in Varying Metrics. In 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 360, pp. 19:1-19:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{chakrabarty_et_al:LIPIcs.FSTTCS.2025.19,
  author =	{Chakrabarty, Deeparnab and Conroy, Jonathan and Sarkar, Ankita},
  title =	{{Clustering in Varying Metrics}},
  booktitle =	{45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)},
  pages =	{19:1--19:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-406-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{360},
  editor =	{Aiswarya, C. and Mehta, Ruta and Roy, Subhajit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2025.19},
  URN =		{urn:nbn:de:0030-drops-251007},
  doi =		{10.4230/LIPIcs.FSTTCS.2025.19},
  annote =	{Keywords: Clustering, approximation algorithms, LP rounding, parameterized and exact algorithms, dynamic programming, fixed parameter tractability, hardness of approximation}
}
Document
Circle-Segment Intersection Queries in Connected Geometric Graphs

Authors: Peyman Afshani, Yannick Bosch, and Sabine Storandt

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
In this paper, we study the problem of efficiently reporting all intersections between a given set of line segments in the plane and a query circle, focusing on the case where the segments form the edges of a connected geometric graph. While previous data structures for circle-segment intersection queries on general segment sets incur high space or query time costs, we exploit the connectivity of the input to obtain significantly improved performance. In fact, we propose a new circle-segment intersection data structure that can be constructed in 𝒪((n + C) log³ n) time and space on connected graphs with n edges and C edge crossings. It answers intersection queries in 𝒪(k log³ n) time, where k denotes the output size. Our method relies on the construction of efficient circle-graph intersection oracles as well as a novel linear-time algorithm to partition the edges of the graph into balanced, connected components, which might be of independent interest. In a proof-of-concept experimental study on real-world road networks, we show that our novel data structure also performs well in practice. Even on networks with millions of edges, the construction time is within minutes and queries are answered in a few milliseconds.

Cite as

Peyman Afshani, Yannick Bosch, and Sabine Storandt. Circle-Segment Intersection Queries in Connected Geometric Graphs. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 3:1-3:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{afshani_et_al:LIPIcs.ISAAC.2025.3,
  author =	{Afshani, Peyman and Bosch, Yannick and Storandt, Sabine},
  title =	{{Circle-Segment Intersection Queries in Connected Geometric Graphs}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{3:1--3:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.3},
  URN =		{urn:nbn:de:0030-drops-249114},
  doi =		{10.4230/LIPIcs.ISAAC.2025.3},
  annote =	{Keywords: Intersection data structure, Graph partitioning, Dobkin-Kirkpatrick hierarchy}
}
Document
APPROX
Covering a Few Submodular Constraints and Applications

Authors: Tanvi Bajpai, Chandra Chekuri, and Pooja Kulkarni

Published in: LIPIcs, Volume 353, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)


Abstract
We consider the problem of covering multiple submodular constraints. Given a finite ground set N, a cost function c: N → ℝ_+, r monotone submodular functions f_1,f_2,…,f_r over N and requirements b_1,b_2,…,b_r the goal is to find a minimum cost subset S ⊆ N such that f_i(S) ≥ b_i for 1 ≤ i ≤ r. When r = 1 this is the well-known Submodular Set Cover problem. Previous work [Chekuri et al., 2022] considered the setting when r is large and developed bi-criteria approximation algorithms, and approximation algorithms for the important special case when each f_i is a weighted coverage function. These are fairly general models and capture several concrete and interesting problems as special cases. The approximation ratios for these problem are at least Ω(log r) which is unavoidable when r is part of the input. In this paper, motivated by some recent applications, we consider the problem when r is a fixed constant and obtain two main results. When the f_i are weighted coverage functions from a deletion-closed set system we obtain a (1+ε)(e/(e-1))(1+β)-approximation where β is the approximation ratio for the underlying set cover instances via the natural LP. Second, for covering multiple submodular constraints we obtain a randomized bi-criteria approximation algorithm that for any given integer α ≥ 1 outputs a set S such that f_i(S) ≥ (1-1/e^α-ε)b_i for each i ∈ [r] and 𝔼[c(S)] ≤ (1+ε)α ⋅ OPT. These results show that one can obtain nearly as good an approximation for any fixed r as what one would achieve for r = 1. We also demonstrate applications of our results to implicit covering problems such as fair facility location.

Cite as

Tanvi Bajpai, Chandra Chekuri, and Pooja Kulkarni. Covering a Few Submodular Constraints and Applications. In Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 353, pp. 25:1-25:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bajpai_et_al:LIPIcs.APPROX/RANDOM.2025.25,
  author =	{Bajpai, Tanvi and Chekuri, Chandra and Kulkarni, Pooja},
  title =	{{Covering a Few Submodular Constraints and Applications}},
  booktitle =	{Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)},
  pages =	{25:1--25:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-397-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{353},
  editor =	{Ene, Alina and Chattopadhyay, Eshan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.APPROX/RANDOM.2025.25},
  URN =		{urn:nbn:de:0030-drops-243917},
  doi =		{10.4230/LIPIcs.APPROX/RANDOM.2025.25},
  annote =	{Keywords: covering, linear programming, rounding, fairness}
}
Document
Standards-Based Grading in Undergraduate Courses for Technology Majors

Authors: Ruth Lamprecht, Jonathan McCurdy, Melanie Butler, Brian Heinold, and Daniel Salinas Duron

Published in: OASIcs, Volume 133, 6th International Computer Programming Education Conference (ICPEC 2025)


Abstract
This paper outlines the methods employed by several instructors within a single department to implement standards-based assessments. The authors began integrating standards across multiple courses in their computer science, cybersecurity, data science, and mathematics programs. This shift was driven by a desire to promote equity in grading and to address the growing influence of artificial intelligence, which can obscure a student’s true understanding. In this work, the authors examine the supporting research that guided their motivation and informed their implementation of various grading techniques. With an emphasis on courses involving technology, they also detail the processes they use to manage the new assessments, provide examples of assessment questions, and share key lessons learned in making this transition successful for both instructors and students. This work addresses a significant gap in the literature, as there appears to be a notable lack of resources on the application of standards-based grading in technical disciplines.

Cite as

Ruth Lamprecht, Jonathan McCurdy, Melanie Butler, Brian Heinold, and Daniel Salinas Duron. Standards-Based Grading in Undergraduate Courses for Technology Majors. In 6th International Computer Programming Education Conference (ICPEC 2025). Open Access Series in Informatics (OASIcs), Volume 133, pp. 10:1-10:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lamprecht_et_al:OASIcs.ICPEC.2025.10,
  author =	{Lamprecht, Ruth and McCurdy, Jonathan and Butler, Melanie and Heinold, Brian and Salinas Duron, Daniel},
  title =	{{Standards-Based Grading in Undergraduate Courses for Technology Majors}},
  booktitle =	{6th International Computer Programming Education Conference (ICPEC 2025)},
  pages =	{10:1--10:14},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-393-5},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{133},
  editor =	{Queir\'{o}s, Ricardo and Pinto, M\'{a}rio and Portela, Filipe and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ICPEC.2025.10},
  URN =		{urn:nbn:de:0030-drops-240408},
  doi =		{10.4230/OASIcs.ICPEC.2025.10},
  annote =	{Keywords: Alternative Grading, Standards-Based Grading, Computer Science}
}
Document
APPROX
Multipass Linear Sketches for Geometric LP-Type Problems

Authors: N. Efe Çekirge, William Gay, and David P. Woodruff

Published in: LIPIcs, Volume 353, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)


Abstract
LP-type problems such as the Minimum Enclosing Ball (MEB), Linear Support Vector Machine (SVM), Linear Programming (LP), and Semidefinite Programming (SDP) are fundamental combinatorial optimization problems, with many important applications in machine learning applications such as classification, bioinformatics, and noisy learning. We study LP-type problems in several streaming and distributed big data models, giving ε-approximation linear sketching algorithms with a focus on the high accuracy regime with low dimensionality d, that is, when d < (1/ε)^0.999. Our main result is an O(ds) pass algorithm with O(s(√d/ε)^{3d/s}) ⋅ poly(d, log (1/ε)) space complexity in words, for any parameter s ∈ [1, d log (1/ε)], to solve ε-approximate LP-type problems of O(d) combinatorial and VC dimension. Notably, by taking s = d log (1/ε), we achieve space complexity polynomial in d and polylogarithmic in 1/ε, presenting exponential improvements in 1/ε over current algorithms. We complement our results by showing lower bounds of (1/ε)^Ω(d) for any 1-pass algorithm solving the (1 + ε)-approximation MEB and linear SVM problems, further motivating our multi-pass approach.

Cite as

N. Efe Çekirge, William Gay, and David P. Woodruff. Multipass Linear Sketches for Geometric LP-Type Problems. In Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 353, pp. 8:1-8:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cekirge_et_al:LIPIcs.APPROX/RANDOM.2025.8,
  author =	{\c{C}ekirge, N. Efe and Gay, William and Woodruff, David P.},
  title =	{{Multipass Linear Sketches for Geometric LP-Type Problems}},
  booktitle =	{Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)},
  pages =	{8:1--8:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-397-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{353},
  editor =	{Ene, Alina and Chattopadhyay, Eshan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.APPROX/RANDOM.2025.8},
  URN =		{urn:nbn:de:0030-drops-243741},
  doi =		{10.4230/LIPIcs.APPROX/RANDOM.2025.8},
  annote =	{Keywords: Streaming, sketching, LP-type problems}
}
Document
Support Vector Machines in the Hilbert Geometry

Authors: Aditya Acharya, Auguste H. Gezalyan, Julian Vanecek, David M. Mount, and Sunil Arya

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
Support Vector Machines (SVMs) are a class of classification models in machine learning that are based on computing a maximum-margin separator between two sets of points. The SVM problem has been heavily studied for Euclidean geometry and for a number of kernels. In this paper, we consider the linear SVM problem in the Hilbert metric, a non-Euclidean geometry defined over a convex body. We present efficient algorithms for computing the SVM classifier for a set of n points in the Hilbert metric defined by convex polygons in the plane and convex polytopes in d-dimensional space. We also consider the problems in the related Funk distance.

Cite as

Aditya Acharya, Auguste H. Gezalyan, Julian Vanecek, David M. Mount, and Sunil Arya. Support Vector Machines in the Hilbert Geometry. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 3:1-3:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{acharya_et_al:LIPIcs.WADS.2025.3,
  author =	{Acharya, Aditya and Gezalyan, Auguste H. and Vanecek, Julian and Mount, David M. and Arya, Sunil},
  title =	{{Support Vector Machines in the Hilbert Geometry}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{3:1--3:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.3},
  URN =		{urn:nbn:de:0030-drops-242348},
  doi =		{10.4230/LIPIcs.WADS.2025.3},
  annote =	{Keywords: Support vector machines, Hilbert geometry, linear classification, machine learning, LP-type problems}
}
Document
Evolving Distributions Under Local Motion

Authors: Aditya Acharya and David M. Mount

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
Geometric data sets that arise in modern applications are often very large and change dynamically over time. A popular framework for dealing with such data sets is the evolving data framework, where a discrete structure continuously varies over time due to the unseen actions of an evolver, which makes small changes to the data. An algorithm probes the current state through an oracle, and the objective is to maintain a hypothesis of the data set’s current state that is close to its actual state at all times. In this paper, we apply this framework to maintaining a set of n point objects in motion in d-dimensional Euclidean space. To model the uncertainty in the object locations, both the ground truth and hypothesis are based on spatial probability distributions, and the distance between them is measured by the Kullback-Leibler divergence (relative entropy). We introduce a simple and intuitive motion model in which, with each time step, the distance that any object can move is a fraction of the distance to its nearest neighbor. We present an algorithm that, in steady state, guarantees a distance of O(n) between the true and hypothesized placements. We also show that for any algorithm in this model, there is an evolver that can generate a distance of Ω(n), implying that our algorithm is asymptotically optimal.

Cite as

Aditya Acharya and David M. Mount. Evolving Distributions Under Local Motion. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 4:1-4:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{acharya_et_al:LIPIcs.WADS.2025.4,
  author =	{Acharya, Aditya and Mount, David M.},
  title =	{{Evolving Distributions Under Local Motion}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{4:1--4:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.4},
  URN =		{urn:nbn:de:0030-drops-242357},
  doi =		{10.4230/LIPIcs.WADS.2025.4},
  annote =	{Keywords: Evolving data, tracking, imprecise points, local-motion model, online algorithms}
}
Document
Clustering Point Sets Revisited

Authors: Md. Billal Hossain and Benjamin Raichel

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
In the sets clustering problem one is given a collection of point sets 𝒫 = {P_1,… P_m} in ℝ^d, where for any set of k centers in ℝ^d, each P_i is assigned to its nearest center as determine by some local cost functions. The goal is then to select a set of k centers to minimize some global cost function of the corresponding local assignment costs. Specifically, we consider either summing or taking the maximum cost over all P_i, where for each P_i the cost of assigning it to a center c is either max_{p ∈ P_i} ‖c-p‖, ∑_{p ∈ P_i} ‖c-p‖, or ∑_{p ∈ P_i} ‖c-p‖². Different combinations of the global and local cost functions naturally generalize the k-center, k-median, and k-means clustering problems. In this paper, we improve the prior results for the natural generalization of k-center, give the first result for the natural generalization of k-means, and give results for generalizations of k-median and k-center which differ from those previously studied.

Cite as

Md. Billal Hossain and Benjamin Raichel. Clustering Point Sets Revisited. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 38:1-38:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{hossain_et_al:LIPIcs.WADS.2025.38,
  author =	{Hossain, Md. Billal and Raichel, Benjamin},
  title =	{{Clustering Point Sets Revisited}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{38:1--38:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.38},
  URN =		{urn:nbn:de:0030-drops-242693},
  doi =		{10.4230/LIPIcs.WADS.2025.38},
  annote =	{Keywords: Clustering, k-center, k-median, k-means}
}
Document
Fast Kd-Trees for the Kullback-Leibler Divergence and Other Decomposable Bregman Divergences

Authors: Tuyen Pham and Hubert Wagner

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
The contributions of the paper span theoretical and implementational results. First, we prove that Kd-trees can be extended to ℝ^d with the distance measured by an arbitrary Bregman divergence. Perhaps surprisingly, this shows that the triangle inequality is not necessary for correct pruning in Kd-trees. Second, we offer an efficient algorithm and C++ implementation for nearest neighbour search for decomposable Bregman divergences. The implementation supports the Kullback-Leibler divergence (relative entropy) which is a popular distance between probability vectors and is commonly used in statistics and machine learning. This is a step toward broadening the usage of computational geometry algorithms. Our benchmarks show that our implementation efficiently handles both exact and approximate nearest neighbour queries. Compared to a linear search, we achieve two orders of magnitude speedup for practical scenarios in dimension up to 100. Our solution is simpler and more efficient than competing methods.

Cite as

Tuyen Pham and Hubert Wagner. Fast Kd-Trees for the Kullback-Leibler Divergence and Other Decomposable Bregman Divergences. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 45:1-45:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{pham_et_al:LIPIcs.WADS.2025.45,
  author =	{Pham, Tuyen and Wagner, Hubert},
  title =	{{Fast Kd-Trees for the Kullback-Leibler Divergence and Other Decomposable Bregman Divergences}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{45:1--45:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.45},
  URN =		{urn:nbn:de:0030-drops-242766},
  doi =		{10.4230/LIPIcs.WADS.2025.45},
  annote =	{Keywords: Kd-tree, k-d tree, nearest neighbour search, Bregman divergence, decomposable Bregman divergence, KL divergence, relative entropy, cross entropy, Shannon’s entropy}
}
Document
Farthest-Point Voronoi Diagrams in the Hilbert Metric

Authors: Minju Song, Mook Kwon Jung, and Hee-Kap Ahn

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
The Hilbert metric, introduced by David Hilbert in 1895, is a projective metric defined on a bounded convex domain in a Euclidean space. For a convex polygon with m vertices and n point sites lying inside the polygon in the plane, it is shown that the nearest-point Voronoi diagram in the Hilbert metric has combinatorial complexity of O(mn) [Gezalyan and Mount, SoCG 2023]. In this paper, we show that the farthest-point Voronoi diagram in the Hilbert metric has combinatorial complexity O(m), which is independent of the number of sites. Also, we present an efficient algorithm to compute the farthest-point Voronoi diagram.

Cite as

Minju Song, Mook Kwon Jung, and Hee-Kap Ahn. Farthest-Point Voronoi Diagrams in the Hilbert Metric. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 48:1-48:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{song_et_al:LIPIcs.WADS.2025.48,
  author =	{Song, Minju and Jung, Mook Kwon and Ahn, Hee-Kap},
  title =	{{Farthest-Point Voronoi Diagrams in the Hilbert Metric}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{48:1--48:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.48},
  URN =		{urn:nbn:de:0030-drops-242797},
  doi =		{10.4230/LIPIcs.WADS.2025.48},
  annote =	{Keywords: Farthest-point Voronoi diagram, Hilbert metric, Complexity, Algorithm}
}
Document
SimdMinimizers: Computing Random Minimizers, fast

Authors: Ragnar Groot Koerkamp and Igor Martayan

Published in: LIPIcs, Volume 338, 23rd International Symposium on Experimental Algorithms (SEA 2025)


Abstract
Motivation. Because of the rapidly-growing amount of sequencing data, computing sketches of large textual datasets has become an essential preprocessing task. These sketches are typically much smaller than the input sequences, but preserve sufficient information for downstream analysis. Minimizers are an especially popular sketching technique and used in a wide variety of applications. They sample at least one out of every w consecutive k-mers. As DNA sequencers are getting more accurate, some applications can afford to use a larger w and hence sparser and smaller sketches. And as sketches get smaller, their analysis becomes faster, so the time spent sketching the full-sized input becomes more of a bottleneck. Methods. Our library simd-minimizers implements a random minimizer algorithm using SIMD instructions. It supports both AVX2 and NEON architectures. Its main novelty is two-fold. First, it splits the input into 8 chunks that are streamed over in parallel through all steps of the algorithm. This is enabled by using the completely deterministic two-stacks sliding window minimum algorithm, which seems not to have been used before for finding minimizers. Results. Our library is up to 6.8× faster than a scalar implementation of the rescan method when w = 5 is small, and 3.4× faster for larger w = 19. Computing canonical minimizers is less than 50% slower than computing forward minimizers, and over 15× faster than the existing implementation in the minimizer-iter crate. Our library finds all (canonical) minimizers of a 3.2 Gbp human genome in 5.2 (resp. 6.7) seconds.

Cite as

Ragnar Groot Koerkamp and Igor Martayan. SimdMinimizers: Computing Random Minimizers, fast. In 23rd International Symposium on Experimental Algorithms (SEA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 338, pp. 20:1-20:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{grootkoerkamp_et_al:LIPIcs.SEA.2025.20,
  author =	{Groot Koerkamp, Ragnar and Martayan, Igor},
  title =	{{SimdMinimizers: Computing Random Minimizers, fast}},
  booktitle =	{23rd International Symposium on Experimental Algorithms (SEA 2025)},
  pages =	{20:1--20:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-375-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{338},
  editor =	{Mutzel, Petra and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2025.20},
  URN =		{urn:nbn:de:0030-drops-232581},
  doi =		{10.4230/LIPIcs.SEA.2025.20},
  annote =	{Keywords: Minimizers, Randomized algorithms, Sketching, Hashing}
}
Document
U-Index: A Universal Indexing Framework for Matching Long Patterns

Authors: Lorraine A. K. Ayad, Gabriele Fici, Ragnar Groot Koerkamp, Grigorios Loukides, Rob Patro, Giulio Ermanno Pibiri, and Solon P. Pissis

Published in: LIPIcs, Volume 338, 23rd International Symposium on Experimental Algorithms (SEA 2025)


Abstract
Motivation. Text indexing is a fundamental and well-studied problem. Classic solutions to this problem either replace the original text with a compressed representation, e.g., the FM-index and its variants, or keep it uncompressed but attach some redundancy - an index - to accelerate matching, e.g., the suffix array. The former solutions thus retain excellent compressed space, but are practically slow to construct and query. The latter approaches, instead, sacrifice space efficiency but are typically faster; for example, the suffix array takes much more space than the text itself for commonly used alphabets, like ASCII or DNA, but it is very fast to construct and query. Methods. In this paper, we show that efficient text indexing can be achieved using just a small extra space on top of the original text, provided that the query patterns are sufficiently long. More specifically, we develop a new indexing paradigm in which a sketch of a query pattern is first matched against a sketch of the text. Once candidate matches are retrieved, they are verified using the original text. This paradigm is thus universal in the sense that it allows us to use any solution to index the sketched text, like a suffix array, FM-index, or r-index. Results. We explore both the theory and the practice of this universal framework. With an extensive experimental analysis, we show that, surprisingly, universal indexes can be constructed much faster than their unsketched counterparts and take a fraction of the space, as a direct consequence of (i) having a lower bound on the length of patterns and (ii) working in sketch space. Furthermore, these data structures have the potential of retaining or even improving query time, because matching against the sketched text is faster and verifying candidates can be theoretically done in constant time per occurrence (or, in practice, by short and cache-friendly scans of the text). Finally, we discuss some important applications of this novel indexing paradigm to computational biology. We hypothesize that such indexes will be particularly effective when the queries are sufficiently long, and so we demonstrate applications in long-read mapping.

Cite as

Lorraine A. K. Ayad, Gabriele Fici, Ragnar Groot Koerkamp, Grigorios Loukides, Rob Patro, Giulio Ermanno Pibiri, and Solon P. Pissis. U-Index: A Universal Indexing Framework for Matching Long Patterns. In 23rd International Symposium on Experimental Algorithms (SEA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 338, pp. 4:1-4:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{ayad_et_al:LIPIcs.SEA.2025.4,
  author =	{Ayad, Lorraine A. K. and Fici, Gabriele and Groot Koerkamp, Ragnar and Loukides, Grigorios and Patro, Rob and Pibiri, Giulio Ermanno and Pissis, Solon P.},
  title =	{{U-Index: A Universal Indexing Framework for Matching Long Patterns}},
  booktitle =	{23rd International Symposium on Experimental Algorithms (SEA 2025)},
  pages =	{4:1--4:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-375-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{338},
  editor =	{Mutzel, Petra and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2025.4},
  URN =		{urn:nbn:de:0030-drops-232420},
  doi =		{10.4230/LIPIcs.SEA.2025.4},
  annote =	{Keywords: Text Indexing, Sketching, Minimizers, Hashing}
}
Document
Track A: Algorithms, Complexity and Games
Light Spanners with Small Hop-Diameter

Authors: Sujoy Bhore and Lazar Milenković

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
Lightness, sparsity, and hop-diameter are the fundamental parameters of geometric spanners. Arya et al. [STOC'95] showed in their seminal work that there exists a construction of Euclidean (1+ε)-spanners with hop-diameter O(log n) and lightness O(log n). They also gave a general tradeoff of hop-diameter k and sparsity O(α_k(n)), where α_k is a very slowly growing inverse of an Ackermann-style function. The former combination of logarithmic hop-diameter and lightness is optimal due to the lower bound by Dinitz et al. [FOCS'08]. Later, Elkin and Solomon [STOC'13] generalized the light spanner construction to doubling metrics and extended the tradeoff for more values of hop-diameter k. In a recent line of work [SoCG'22, SoCG'23], Le et al. proved that the aforementioned tradeoff between the hop-diameter and sparsity is tight for every choice of hop-diameter k. A fundamental question remains: What is the optimal tradeoff between the hop-diameter and lightness for every value of k? In this paper, we present a general framework for constructing light spanners with small hop-diameter. Our framework is based on tree covers. In particular, we show that if a metric admits a tree cover with γ trees, stretch t, and lightness L, then it also admits a t-spanner with hop-diameter k and lightness O(kn^{2/k}⋅ γ L). Further, we note that the tradeoff for trees is tight due to a construction in uniform line metric, which is perhaps the simplest tree metric. As a direct consequence of this framework, we obtain new tradeoffs between lightness and hop-diameter for doubling metrics.

Cite as

Sujoy Bhore and Lazar Milenković. Light Spanners with Small Hop-Diameter. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 30:1-30:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bhore_et_al:LIPIcs.ICALP.2025.30,
  author =	{Bhore, Sujoy and Milenkovi\'{c}, Lazar},
  title =	{{Light Spanners with Small Hop-Diameter}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{30:1--30:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.30},
  URN =		{urn:nbn:de:0030-drops-234075},
  doi =		{10.4230/LIPIcs.ICALP.2025.30},
  annote =	{Keywords: Geometric Spanners, Lightness, Hop-Diameter, Recurrences, Lower Bounds}
}
Document
Track A: Algorithms, Complexity and Games
Coresets for Robust Clustering via Black-Box Reductions to Vanilla Case

Authors: Shaofeng H.-C. Jiang and Jianing Lou

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
We devise ε-coresets for robust (k,z)-Clustering with m outliers through black-box reductions to vanilla clustering. Given an ε-coreset construction for vanilla clustering with size N, we construct coresets of size N⋅ polylog(kmε^{-1}) + O_z(min{kmε^{-1}, m ε^{-2z}log^z(kmε^{-1})}) for various metric spaces, where O_z hides 2^{O(zlog z)} factors. This increases the size of the vanilla coreset by a small multiplicative factor of polylog(kmε^{-1}), and the additive term is up to a (ε^{-1}log (km))^{O(z)} factor to the size of the optimal robust coreset. Plugging in recent vanilla coreset results of [Cohen-Addad, Saulpic and Schwiegelshohn, STOC'21; Cohen-Addad, Draganov, Russo, Saulpic and Schwiegelshohn, SODA'25], we obtain the first coresets for (k,z)-Clustering with m outliers with size near-linear in k while previous results have size at least Ω(k²) [Huang, Jiang, Lou and Wu, ICLR'23; Huang, Li, Lu and Wu, SODA'25]. Technically, we establish two conditions under which a vanilla coreset is as well a robust coreset. The first condition requires the dataset to satisfy special structures - it can be broken into "dense" parts with bounded diameter. We combine this with a new bounded-diameter decomposition that has only O_z(km ε^{-1}) non-dense points to obtain the O_z(km ε^{-1}) additive bound. Another sufficient condition requires the vanilla coreset to possess an extra size-preserving property. To utilize this condition, we further give a black-box reduction that turns a vanilla coreset to the one that satisfies the said size-preserving property, and this leads to the alternative O_z(mε^{-2z}log^{z}(kmε^{-1})) additive size bound. We also give low-space implementations of our reductions in the dynamic streaming setting. Combined with known streaming constructions for vanilla coresets [Braverman, Frahling, Lang, Sohler and Yang, ICML'17; Hu, Song, Yang and Zhong, arXiv'1802.00459], we obtain the first dynamic streaming algorithms for coresets for k-Median (and k-Means) with m outliers, using space Õ(k + m) ⋅ poly(dε^{-1}log Δ) for inputs on a discrete grid [Δ]^d.

Cite as

Shaofeng H.-C. Jiang and Jianing Lou. Coresets for Robust Clustering via Black-Box Reductions to Vanilla Case. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 101:1-101:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{jiang_et_al:LIPIcs.ICALP.2025.101,
  author =	{Jiang, Shaofeng H.-C. and Lou, Jianing},
  title =	{{Coresets for Robust Clustering via Black-Box Reductions to Vanilla Case}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{101:1--101:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.101},
  URN =		{urn:nbn:de:0030-drops-234781},
  doi =		{10.4230/LIPIcs.ICALP.2025.101},
  annote =	{Keywords: Coresets, clustering, outliers, streaming algorithms}
}
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