80 Search Results for "Park, Heejin"

Volume

LIPIcs, Volume 248

33rd International Symposium on Algorithms and Computation (ISAAC 2022)

ISAAC 2022, December 19-21, 2022, Seoul, Korea

Editors: Sang Won Bae and Heejin Park

Document
DOI: 10.4230/LIPIcs.STACS.2026.10
A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths

Authors: Julien Baste, Lucas De Meyer, Ugo Giocanti, Etienne Objois, and Timothé Picavet

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)

Abstract
Dumas, Foucaud, Perez and Todinca [SIAM J. Disc. Math., 2024] recently proved that every graph whose edge set can be covered by k shortest paths has pathwidth at most 3^k. In this paper, we improve this upper bound on the pathwidth to a polynomial bound; namely, we show that every graph whose edge set can be covered by k shortest paths has pathwidth O(k⁴), answering a question from the same paper. Moreover, we also prove that when k ≤ 3, every such graph has pathwidth at most k (and this bound is tight). Eventually, we show that even though there exist graphs with arbitrary large treewidth whose vertex set can be covered by 2 isometric trees, every graph whose set of edges can be covered by 2 isometric trees has treewidth at most 2.
Cite as

Julien Baste, Lucas De Meyer, Ugo Giocanti, Etienne Objois, and Timothé Picavet. A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 10:1-10:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{baste_et_al:LIPIcs.STACS.2026.10,
  author =	{Baste, Julien and De Meyer, Lucas and Giocanti, Ugo and Objois, Etienne and Picavet, Timoth\'{e}},
  title =	{{A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{10:1--10:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.10},
  URN =		{urn:nbn:de:0030-drops-254999},
  doi =		{10.4230/LIPIcs.STACS.2026.10},
  annote =	{Keywords: Structural Graph Theory, Coverings, Metrics, Pathwidth, Treewdidth, Parameterized Algorithms, Layerings}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.8
Parameterized Algorithms for the Drone Delivery Problem

Authors: Simon Bartlmae, Andreas Hene, Joshua Könen, and Heiko Röglin

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
Timely delivery and optimal routing remain fundamental challenges in the modern logistics industry. Building on prior work that considers single-package delivery across networks using multiple types of collaborative agents with restricted movement areas (e.g., drones or trucks), we examine the complexity of the problem under structural and operational constraints. Our focus is on minimizing total delivery time by coordinating agents that differ in speed and movement range across a graph. This problem formulation aligns with the recently proposed Drone Delivery Problem with respect to delivery time (DDT), introduced by Erlebach et al. [ISAAC 2022]. We first resolve an open question posed by Erlebach et al. [ISAAC 2022] by showing that even when the delivery network is a path graph, DDT admits no polynomial-time approximation within any polynomially encodable factor a(n), unless P=NP. Additionally, we identify the intersection graph of the agents, where nodes represent agents and edges indicate an overlap of the movement areas of two agents, as an important structural concept. For path graphs, we show that DDT becomes tractable when parameterized by the treewidth w of the intersection graph, and we present an exact FPT algorithm with running time f(w)⋅poly(n,k), for some computable function f. For general graphs, we give an FPT algorithm with running time f(Δ,w)⋅poly(n,k), where Δ is the maximum degree of the intersection graph. In the special case where the intersection graph is a tree, we provide a simple polynomial-time algorithm.
Cite as

Simon Bartlmae, Andreas Hene, Joshua Könen, and Heiko Röglin. Parameterized Algorithms for the Drone Delivery Problem. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 8:1-8:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bartlmae_et_al:LIPIcs.ISAAC.2025.8,
  author =	{Bartlmae, Simon and Hene, Andreas and K\"{o}nen, Joshua and R\"{o}glin, Heiko},
  title =	{{Parameterized Algorithms for the Drone Delivery Problem}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{8:1--8:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.8},
  URN =		{urn:nbn:de:0030-drops-249162},
  doi =		{10.4230/LIPIcs.ISAAC.2025.8},
  annote =	{Keywords: Complexity, Delivery, FPT algorithms, Graph Theory}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.46
Realizing Metric Spaces with Convex Obstacles

Authors: Sándor Kisfaludi-Bak and Leonidas Theocharous

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
The presence of obstacles has a significant impact on distance computation, motion-planning, and visibility. These problems have been studied extensively in the planar setting, while our understanding of these problems in 3- and higher-dimensional spaces is still rudimentary. In this paper, we study the impact of different types of obstacles on the induced geodesic metric in 3-dimensional Euclidean space. We say that a finite metric space (X, dist_X) is approximately realizable by a collection 𝒯 of obstacles in ℝ³ if for any ε > 0 it can be embedded into (ℝ³⧵⋃_{T∈𝒯} T, dist_𝒯) with worst-case multiplicative distortion 1+ε, where dist_𝒯 denotes the geodesic distance in the free space induced by 𝒯. We focus on three key geometric properties of obstacles -convexity, disjointness, and fatness- and examine how dropping each one of them affects the existence of such embeddings. Our main result concerns dropping the fatness property: we demonstrate that any finite metric space is realizable with 1+ε worst-case multiplicative distortion using a collection of convex and pairwise disjoint obstacles in ℝ³, even if the obstacles are congruent and equilateral triangles. Based on the same construction, we can also show that if we require fatness but drop any of the other two properties instead, then we can still approximately realize any finite metric space. Our results have important implications on the approximability of tsp with obstacles, a natural variant of tsp introduced recently by Alkema et al. (ESA 2022). Specifically, we use the recent results of Banerjee et al. on tsp in doubling spaces (FOCS 2024) and of Chew et al. on distances among obstacles (Inf. Process. Lett. 2002) to show that tsp with obstacles admits a PTAS if the obstacles are convex, fat, and pairwise disjoint. If any of these three properties is dropped, then our results, combined with the APX-hardness of Metric tsp, demonstrate that tsp with obstacles is APX-hard.
Cite as

Sándor Kisfaludi-Bak and Leonidas Theocharous. Realizing Metric Spaces with Convex Obstacles. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 46:1-46:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{kisfaludibak_et_al:LIPIcs.ISAAC.2025.46,
  author =	{Kisfaludi-Bak, S\'{a}ndor and Theocharous, Leonidas},
  title =	{{Realizing Metric Spaces with Convex Obstacles}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{46:1--46:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.46},
  URN =		{urn:nbn:de:0030-drops-249545},
  doi =		{10.4230/LIPIcs.ISAAC.2025.46},
  annote =	{Keywords: traveling salesman, geodesic distance}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.29
The Tape Reconfiguration Problem and Its Consequences for Dominating Set Reconfiguration

Authors: Nicolas Bousquet, Quentin Deschamps, Arnaud Mary, Amer E. Mouawad, and Théo Pierron

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
A dominating set of a graph G = (V,E) is a set of vertices D ⊆ V whose closed neighborhood is V, i.e., N[D] = V. We view a dominating set as a collection of tokens placed on the vertices of D. In the token sliding variant of the Dominating Set Reconfiguration problem (TS-DSR), we seek to transform a source dominating set into a target dominating set in G by sliding tokens along edges, and while maintaining a dominating set all along the transformation. TS-DSR is known to be PSPACE-complete even restricted to graphs of pathwidth w, for some non-explicit constant w and to be XL-complete parameterized by the size k of the solution. The first contribution of this article consists in using a novel approach to provide the first explicit constant for which the TS-DSR problem is PSPACE-complete, a question that was left open in the literature. From a parameterized complexity perspective, the token jumping variant of DSR, i.e., where tokens can jump to arbitrary vertices, is known to be FPT when parameterized by the size of the dominating sets on nowhere dense classes of graphs. But, in contrast, no non-trivial result was known about TS-DSR. We prove that DSR is actually much harder in the sliding model since it is XL-complete when restricted to bounded pathwidth graphs and even when parameterized by k plus the feedback vertex set number of the graph. This gives, for the first time, a difference of behavior between the complexity under token sliding and token jumping for some problem on graphs of bounded treewidth. All our results are obtained using a brand new method, based on the hardness of the so-called Tape Reconfiguration problem, a problem we believe to be of independent interest. We complement these hardness results with a positive result showing that DSR (parameterized by k) in the sliding model is FPT on planar graphs, also answering an open problem from the literature.
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Nicolas Bousquet, Quentin Deschamps, Arnaud Mary, Amer E. Mouawad, and Théo Pierron. The Tape Reconfiguration Problem and Its Consequences for Dominating Set Reconfiguration. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 29:1-29:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bousquet_et_al:LIPIcs.ESA.2025.29,
  author =	{Bousquet, Nicolas and Deschamps, Quentin and Mary, Arnaud and Mouawad, Amer E. and Pierron, Th\'{e}o},
  title =	{{The Tape Reconfiguration Problem and Its Consequences for Dominating Set Reconfiguration}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{29:1--29:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.29},
  URN =		{urn:nbn:de:0030-drops-244974},
  doi =		{10.4230/LIPIcs.ESA.2025.29},
  annote =	{Keywords: combinatorial reconfiguration, parameterized complexity, structural graph parameters, treewidth, dominating set}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.82
Buffered Partially-Persistent External-Memory Search Trees

Authors: Gerth Stølting Brodal, Casper Moldrup Rysgaard, and Rolf Svenning

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
We present an optimal partially-persistent external-memory search tree with amortized I/O bounds matching those achieved by the non-persistent B^{ε}-tree by Brodal and Fagerberg [SODA 2003]. In a partially-persistent data structure, each update creates a new version. All past versions can be queried, but only the current version can be updated. Operations should be efficient with respect to the size N_v of the accessed version v. For any parameter 0 < ε < 1, our data structure supports insertions and deletions in amortized 𝒪(1/(ε B^{1 - ε}) log_B N_v) I/Os, where B is the external-memory block size. It also supports successor and range reporting queries in amortized 𝒪(1/ε log_B N_v + K/B) I/Os, where K is the number of keys reported. The space usage of the data structure is linear in the total number of updates. We make the standard and minimal assumption that the internal memory has size M ≥ 2B. The previous state-of-the-art external-memory partially-persistent search tree by Arge, Danner and Teh [JEA 2003] supports all operations in worst-case 𝒪(log_B N_v + K/B) I/Os, matching the bounds achieved by the classical B-tree by Bayer and McCreight [Acta Informatica 1972]. Our data structure successfully combines buffering updates with partial persistence. The I/O bounds can also be achieved in the worst-case sense, by slightly modifying our data structure and under the requirement that the memory size M = Ω(B^{1-ε} log₂(max_v N_v)). For updates, where the I/O bound is o(1), we assume that the I/Os are performed evenly spread out among the updates (by performing buffer-overflows incrementally). The worst-case result slightly improves the memory requirement over the previous ephemeral external-memory dictionary by Das, Iacono, and Nekrich (ISAAC 2022), who achieved matching worst-case I/O bounds but required M = Ω(B log_B N), where N is the size of the current dictionary.
Cite as

Gerth Stølting Brodal, Casper Moldrup Rysgaard, and Rolf Svenning. Buffered Partially-Persistent External-Memory Search Trees. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 82:1-82:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{brodal_et_al:LIPIcs.ESA.2025.82,
  author =	{Brodal, Gerth St{\o}lting and Rysgaard, Casper Moldrup and Svenning, Rolf},
  title =	{{Buffered Partially-Persistent External-Memory Search Trees}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{82:1--82:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.82},
  URN =		{urn:nbn:de:0030-drops-245507},
  doi =		{10.4230/LIPIcs.ESA.2025.82},
  annote =	{Keywords: B-tree, buffered updates, partial persistence, external memory}
}
Document
DOI: 10.4230/LIPIcs.TQC.2025.1
Quantum Search with In-Place Queries

Authors: Blake Holman, Ronak Ramachandran, and Justin Yirka

Published in: LIPIcs, Volume 350, 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)

Abstract
Quantum query complexity is typically characterized in terms of xor queries |x,y⟩ ↦ |x,y⊕ f(x)⟩ or phase queries, which ensure that even queries to non-invertible functions are unitary. When querying a permutation, another natural model is unitary: in-place queries |x⟩↦ |f(x)⟩. Some problems are known to require exponentially fewer in-place queries than xor queries, but no separation has been shown in the opposite direction. A candidate for such a separation was the problem of inverting a permutation over N elements. This task, equivalent to unstructured search in the context of permutations, is solvable with O(√N) xor queries but was conjectured to require Ω(N) in-place queries. We refute this conjecture by designing a quantum algorithm for Permutation Inversion using O(√N) in-place queries. Our algorithm achieves the same speedup as Grover’s algorithm despite the inability to efficiently uncompute queries or perform straightforward oracle-controlled reflections. Nonetheless, we show that there are indeed problems which require fewer xor queries than in-place queries. We introduce a subspace-conversion problem called Function Erasure that requires 1 xor query and Θ(√N) in-place queries. Then, we build on a recent extension of the quantum adversary method to characterize exact conditions for a decision problem to exhibit such a separation, and we propose a candidate problem.
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Blake Holman, Ronak Ramachandran, and Justin Yirka. Quantum Search with In-Place Queries. In 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 350, pp. 1:1-1:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{holman_et_al:LIPIcs.TQC.2025.1,
  author =	{Holman, Blake and Ramachandran, Ronak and Yirka, Justin},
  title =	{{Quantum Search with In-Place Queries}},
  booktitle =	{20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)},
  pages =	{1:1--1:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-392-8},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{350},
  editor =	{Fefferman, Bill},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.TQC.2025.1},
  URN =		{urn:nbn:de:0030-drops-240502},
  doi =		{10.4230/LIPIcs.TQC.2025.1},
  annote =	{Keywords: Quantum algorithms, query complexity, quantum complexity theory, quantum search, Grover’s algorithm, permutation inversion}
}
Document
DOI: 10.4230/OASIcs.Manzini.3
BWT for String Collections

Authors: Davide Cenzato, Zsuzsanna Lipták, Nadia Pisanti, Giovanna Rosone, and Marinella Sciortino

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)

Abstract
We survey the different methods used for extending the BWT to collections of strings, following largely [Cenzato and Lipták, CPM 2022, Bioinformatics 2024]. We analyze the specific aspects and combinatorial properties of the resulting BWT variants and give a categorization of publicly available tools for computing the BWT of string collections. We show how the specific method used impacts on the resulting transform, including the number of runs, and on the dynamicity of the transform with respect to adding or removing strings from the collection. We then focus on the number of runs of these BWT variants and present the optimal BWT introduced in [Cenzato et al., DCC 2023], which implements an algorithm originally proposed by [Bentley et al., ESA 2020] to minimize the number of BWT-runs. We also discuss several recent heuristics and study their impact on the compression of biological sequences. We conclude with an overview of the applications and the impact of the BWT of string collections in bioinformatics.
Cite as

Davide Cenzato, Zsuzsanna Lipták, Nadia Pisanti, Giovanna Rosone, and Marinella Sciortino. BWT for String Collections. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 3:1-3:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{cenzato_et_al:OASIcs.Manzini.3,
  author =	{Cenzato, Davide and Lipt\'{a}k, Zsuzsanna and Pisanti, Nadia and Rosone, Giovanna and Sciortino, Marinella},
  title =	{{BWT for String Collections}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{3:1--3:29},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.3},
  URN =		{urn:nbn:de:0030-drops-239113},
  doi =		{10.4230/OASIcs.Manzini.3},
  annote =	{Keywords: Burrows-Wheeler transform, Extended Burrows-Wheeler transform, compressed text indexes, text compression, string collections, bioinformatics}
}
Document
DOI: 10.4230/OASIcs.Manzini.4
Wavelet Tree, Part II: Text Indexing

Authors: Paolo Ferragina, Raffaele Giancarlo, Roberto Grossi, Giovanna Rosone, Rossano Venturini, and Jeffrey Scott Vitter

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)

Abstract
The Wavelet Tree data structure introduced in Grossi, Gupta, and Vitter [Grossi et al., 2003] is a space-efficient technique for rank and select queries that generalizes from binary symbols to an arbitrary multisymbol alphabet. Over the last two decades, it has become a pivotal tool in modern full-text indexing and data compression because of its properties and capabilities in compressing and indexing data, with many applications to information retrieval, genome analysis, data mining, and web search. In this paper, we survey the fascinating history and impact of Wavelet Trees; no doubt many more developments are yet to come. Our survey borrows some content from the authors' earlier works. This paper is divided into two parts: The first part gives a brief history of Wavelet Trees, including its varieties and practical implementations, which appears in the Festschrift dedicated to Roberto Grossi; the second part (this one) deals with Wavelet Tree-based text indexing and is included in the Festschrift dedicated to Giovanni Manzini.
Cite as

Paolo Ferragina, Raffaele Giancarlo, Roberto Grossi, Giovanna Rosone, Rossano Venturini, and Jeffrey Scott Vitter. Wavelet Tree, Part II: Text Indexing. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 4:1-4:10, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ferragina_et_al:OASIcs.Manzini.4,
  author =	{Ferragina, Paolo and Giancarlo, Raffaele and Grossi, Roberto and Rosone, Giovanna and Venturini, Rossano and Vitter, Jeffrey Scott},
  title =	{{Wavelet Tree, Part II: Text Indexing}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{4:1--4:10},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.4},
  URN =		{urn:nbn:de:0030-drops-239127},
  doi =		{10.4230/OASIcs.Manzini.4},
  annote =	{Keywords: Wavelet tree, data compression, text indexing, compressed suffix array, Burrows-Wheeler transform, rank and select}
}
Document
DOI: 10.4230/OASIcs.Manzini.13
Graph Indexing Beyond Wheeler Graphs

Authors: Jarno N. Alanko, Elena Biagi, Massimo Equi, Veli Mäkinen, Simon J. Puglisi, Nicola Rizzo, Kunihiko Sadakane, and Jouni Sirén

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)

Abstract
After the discovery of the FM index, which linked the Burrows-Wheeler transform (BWT) to pattern matching on strings, several contemporaneous strands of research began on indexing more complex structures with the BWT, such as tries, finite languages, de Bruijn graphs, and aligned sequences. These directions can now be viewed as culminating in the theory of Wheeler Graphs, but sometimes they go beyond. This chapter reviews the significant body of "proto Wheeler Graph" indexes, many of which exploit characteristics of their specific case to outperform Wheeler graphs, especially in practice.
Cite as

Jarno N. Alanko, Elena Biagi, Massimo Equi, Veli Mäkinen, Simon J. Puglisi, Nicola Rizzo, Kunihiko Sadakane, and Jouni Sirén. Graph Indexing Beyond Wheeler Graphs. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 13:1-13:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{alanko_et_al:OASIcs.Manzini.13,
  author =	{Alanko, Jarno N. and Biagi, Elena and Equi, Massimo and M\"{a}kinen, Veli and Puglisi, Simon J. and Rizzo, Nicola and Sadakane, Kunihiko and Sir\'{e}n, Jouni},
  title =	{{Graph Indexing Beyond Wheeler Graphs}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{13:1--13:29},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.13},
  URN =		{urn:nbn:de:0030-drops-239215},
  doi =		{10.4230/OASIcs.Manzini.13},
  annote =	{Keywords: indexing, compression, compressed data structures, string algorithms, pattern matching}
}
Document
DOI: 10.4230/OASIcs.Manzini.8
A Taxonomy of LCP-Array Construction Algorithms

Authors: Johannes Fischer and Enno Ohlebusch

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)

Abstract
The combination of the suffix array and the LCP-array can be used to solve many string processing problems efficiently. We review some of the most important sequential LCP-array construction algorithms in random access memory.
Cite as

Johannes Fischer and Enno Ohlebusch. A Taxonomy of LCP-Array Construction Algorithms. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 8:1-8:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{fischer_et_al:OASIcs.Manzini.8,
  author =	{Fischer, Johannes and Ohlebusch, Enno},
  title =	{{A Taxonomy of LCP-Array Construction Algorithms}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{8:1--8:17},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.8},
  URN =		{urn:nbn:de:0030-drops-239166},
  doi =		{10.4230/OASIcs.Manzini.8},
  annote =	{Keywords: longest common prefix array, suffix array, Burrows-Wheeler transform}
}
Document
Complete Volume
DOI: 10.4230/LIPIcs.ISAAC.2022
LIPIcs, Volume 248, ISAAC 2022, Complete Volume

Authors: Sang Won Bae and Heejin Park

Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)

Abstract
LIPIcs, Volume 248, ISAAC 2022, Complete Volume
Cite as

33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, pp. 1-1080, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@Proceedings{bae_et_al:LIPIcs.ISAAC.2022,
  title =	{{LIPIcs, Volume 248, ISAAC 2022, Complete Volume}},
  booktitle =	{33rd International Symposium on Algorithms and Computation (ISAAC 2022)},
  pages =	{1--1080},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-258-7},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{248},
  editor =	{Bae, Sang Won and Park, Heejin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022},
  URN =		{urn:nbn:de:0030-drops-172849},
  doi =		{10.4230/LIPIcs.ISAAC.2022},
  annote =	{Keywords: LIPIcs, Volume 248, ISAAC 2022, Complete Volume}
}
Document
Front Matter
DOI: 10.4230/LIPIcs.ISAAC.2022.0
Front Matter, Table of Contents, Preface, Conference Organization

Authors: Sang Won Bae and Heejin Park

Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)

Abstract
Front Matter, Table of Contents, Preface, Conference Organization
Cite as

33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, pp. 0:i-0:xx, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@InProceedings{bae_et_al:LIPIcs.ISAAC.2022.0,
  author =	{Bae, Sang Won and Park, Heejin},
  title =	{{Front Matter, Table of Contents, Preface, Conference Organization}},
  booktitle =	{33rd International Symposium on Algorithms and Computation (ISAAC 2022)},
  pages =	{0:i--0:xx},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-258-7},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{248},
  editor =	{Bae, Sang Won and Park, Heejin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022.0},
  URN =		{urn:nbn:de:0030-drops-172858},
  doi =		{10.4230/LIPIcs.ISAAC.2022.0},
  annote =	{Keywords: Front Matter, Table of Contents, Preface, Conference Organization}
}
Document
Invited Talk
DOI: 10.4230/LIPIcs.ISAAC.2022.1
Succinct Representations of Graphs (Invited Talk)

Authors: Kunihiko Sadakane

Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)

Abstract
We consider the problem of finding succinct representations of graphs, that is, encodings using asymptotically the minimum number of bits which support queries on the graphs efficiently. For a special class of graphs, there exist many theoretical results and practical implementations on ordered trees. On the other hand, for wider classes of graphs, though there are many results on counting the number of non-isomorphic graphs belonging to a graph class, there were few number of results on their succinct representations until recently. In this talk, we review some recent results on succinct representations of graphs such as interval, permutation, circle, circular-arc, trapezoid, circle-trapezoid, k-polygon, circle-polygon, cograph, separable, ptolemaic, distance hereditary, clique width k, block, cactus, series-parallel, planar, tree width k, path, boxicity k, chordal bipartite, strongly chordal, chordal graphs, etc.
Cite as

Kunihiko Sadakane. Succinct Representations of Graphs (Invited Talk). In 33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, p. 1:1, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@InProceedings{sadakane:LIPIcs.ISAAC.2022.1,
  author =	{Sadakane, Kunihiko},
  title =	{{Succinct Representations of Graphs}},
  booktitle =	{33rd International Symposium on Algorithms and Computation (ISAAC 2022)},
  pages =	{1:1--1:1},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-258-7},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{248},
  editor =	{Bae, Sang Won and Park, Heejin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022.1},
  URN =		{urn:nbn:de:0030-drops-172865},
  doi =		{10.4230/LIPIcs.ISAAC.2022.1},
  annote =	{Keywords: Graph Enumeration, Succinct Data Structure, Compression}
}
Document
Invited Talk
DOI: 10.4230/LIPIcs.ISAAC.2022.2
The Tragedy of Being Almost but Not Quite Planar (Invited Talk)

Authors: Jeff Erickson

Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)

Abstract
Planar graphs have been fertile grounds for algorithms research for decades, both because they model several types of real-world networks, and because they admit simpler and and faster algorithms than arbitrary graphs. Many important structural properties of planar graphs extend naturally to graphs that embed on more complex surfaces. As a result, efficient algorithms for planar graphs often extend naturally to higher-genus surface graphs with little or no modification. I will describe a few of my favorite exceptions to this rule - classical problems that admit simple, efficient, and practical algorithms for planar graphs, but where algorithms for graphs on other surfaces are significantly slower and/or more complex.
Cite as

Jeff Erickson. The Tragedy of Being Almost but Not Quite Planar (Invited Talk). In 33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, p. 2:1, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@InProceedings{erickson:LIPIcs.ISAAC.2022.2,
  author =	{Erickson, Jeff},
  title =	{{The Tragedy of Being Almost but Not Quite Planar}},
  booktitle =	{33rd International Symposium on Algorithms and Computation (ISAAC 2022)},
  pages =	{2:1--2:1},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-258-7},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{248},
  editor =	{Bae, Sang Won and Park, Heejin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022.2},
  URN =		{urn:nbn:de:0030-drops-172875},
  doi =		{10.4230/LIPIcs.ISAAC.2022.2},
  annote =	{Keywords: planar graphs, surface graphs, algorithms, open problems}
}
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