95 Search Results for "Kakimura, Naonori"


Volume

LIPIcs, Volume 283

34th International Symposium on Algorithms and Computation (ISAAC 2023)

ISAAC 2023, December 3-6, 2023, Kyoto, Japan

Editors: Satoru Iwata and Naonori Kakimura

Document
The Parameterized Complexity of Coloring Mixed Graphs

Authors: Antonio Lauerbach, Konstanty Junosza-Szaniawski, Marie Diana Sieper, and Alexander Wolff

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)


Abstract
A mixed graph contains (undirected) edges as well as (directed) arcs, thus generalizing undirected and directed graphs. A proper coloring c of a mixed graph G assigns a positive integer to each vertex such that c(u)≠c(v) for every edge {u,v} and c(u)<c(v) for every arc (u,v) of G. As in classical coloring, the objective is to minimize the number of colors. Thus, mixed (graph) coloring generalizes classical coloring of undirected graphs and allows for more general applications, such as scheduling with precedence constraints, modeling metabolic pathways, and process management in operating systems; see a survey by Sotskov [Mathematics, 2020]. We initiate the systematic study of the parameterized complexity of mixed coloring. We focus on structural graph parameters that lie between cliquewidth and vertex cover, primarily with respect to the underlying undirected graph. Unlike classical coloring, which is fixed-parameter tractable (FPT) parameterized by treewidth or neighborhood diversity, we show that mixed coloring is W[1]-hard for treewidth and even paraNP-hard for neighborhood diversity. To utilize the directedness of arcs, we introduce and analyze natural generalizations of neighborhood diversity and cliquewidth to mixed graphs, and show that mixed coloring becomes FPT when parameterized by (the generalized) mixed neighborhood diversity. Further, we investigate how these parameters are affected if we add transitive arcs, which do not affect colorings. Finally, we provide tight bounds on the chromatic number of mixed graphs, generalizing known bounds on mixed interval graphs.

Cite as

Antonio Lauerbach, Konstanty Junosza-Szaniawski, Marie Diana Sieper, and Alexander Wolff. The Parameterized Complexity of Coloring Mixed Graphs. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 28:1-28:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{lauerbach_et_al:LIPIcs.SWAT.2026.28,
  author =	{Lauerbach, Antonio and Junosza-Szaniawski, Konstanty and Sieper, Marie Diana and Wolff, Alexander},
  title =	{{The Parameterized Complexity of Coloring Mixed Graphs}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{28:1--28:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.28},
  URN =		{urn:nbn:de:0030-drops-260644},
  doi =		{10.4230/LIPIcs.SWAT.2026.28},
  annote =	{Keywords: Mixed Graphs, Coloring, Parameterized Complexity, Structural Graph Parameters}
}
Document
Faster Approximate Linear Matroid Intersection

Authors: Tatsuya Terao

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)


Abstract
We consider a fast approximation algorithm for the linear matroid intersection problem. In this problem, we are given two r × n matrices M₁ and M₂, and the objective is to find a largest set of columns that are linearly independent in both M₁ and M₂. We design a (1 - ε)-approximation algorithm with time complexity Õ_{ε}(nnz(M₁) + nnz(M₂) + r_{*}^{ω}), where nnz(M_i) denotes the number of nonzero entries in M_i for i = 1, 2, r_{*} denotes the maximum size of a common independent set, and ω < 2.372 denotes the matrix multiplication exponent. Our approximation algorithm is faster than the exact algorithm by Harvey [FOCS'06 & SICOMP'09] and Cheung-Kwok-Lau [STOC'12 & JACM'13], which runs in Õ(nnz(M₁) + nnz(M₂) + n r_{*}^{ω - 1}) time. We also develop a fast (1 - ε)-approximation algorithm for the weighted version of the linear matroid intersection problem. In fact, we design a (1 - ε)-approximation algorithm for weighted linear matroid intersection with time complexity Õ_{ε}(nnz(M₁) + nnz(M₂) + r_{*}^{ω}). Our algorithm improves upon the (1 - ε)-approximation algorithm by Huang-Kakimura-Kamiyama [SODA'16 & Math. Program.'19], which runs in Õ_{ε}(nnz(M₁) + nnz(M₂) + nr_{*}^{ω - 1}) time. To obtain these results, we combine Quanrud’s adaptive sparsification framework [ICALP'24] with a simple yet effective method for efficiently checking whether a given vector lies in the linear span of a subset of vectors, which is of independent interest.

Cite as

Tatsuya Terao. Faster Approximate Linear Matroid Intersection. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 39:1-39:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{terao:LIPIcs.SWAT.2026.39,
  author =	{Terao, Tatsuya},
  title =	{{Faster Approximate Linear Matroid Intersection}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{39:1--39:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.39},
  URN =		{urn:nbn:de:0030-drops-260756},
  doi =		{10.4230/LIPIcs.SWAT.2026.39},
  annote =	{Keywords: Linear matroid intersection, fast approximation algorithm}
}
Document
Improved Approximation Ratios for the Shortest Common Superstring Problem with Reverse Complements

Authors: Ryosuke Yamano and Tetsuo Shibuya

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)


Abstract
The Shortest Common Superstring (SCS) problem asks for the shortest string that contains each of a given set of strings as a substring. Its reverse-complement variant, the Shortest Common Superstring problem with Reverse Complements (SCS-RC), naturally arises in bioinformatics applications, where for each input string, either the string itself or its reverse complement must appear as a substring of the superstring. The well-known MGREEDY algorithm for the standard SCS constructs a superstring by first computing an optimal cycle cover on the overlap graph and then concatenating the strings corresponding to the cycles, while its refined variant, TGREEDY, further improves the approximation ratio. Although the original 4- and 3-approximation bounds of these algorithms have been successively improved for the standard SCS, no such progress has been made for the reverse-complement setting. A previous study extended MGREEDY to SCS-RC with a 4-approximation guarantee and briefly suggested that extending TGREEDY to the reverse-complement setting could achieve a 3-approximation. In this work, we strengthen these results by proving that the extensions of MGREEDY and TGREEDY to the reverse-complement setting achieve 3.75- and 2.875-approximation ratios, respectively. Our analysis extends the classical proofs for the standard SCS to handle the bidirectional overlaps introduced by reverse complements. These results provide the first formal improvement of approximation guarantees for SCS-RC, with the 2.875-approximate algorithm currently representing the best known bound for this problem.

Cite as

Ryosuke Yamano and Tetsuo Shibuya. Improved Approximation Ratios for the Shortest Common Superstring Problem with Reverse Complements. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 15:1-15:11, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{yamano_et_al:LIPIcs.CPM.2026.15,
  author =	{Yamano, Ryosuke and Shibuya, Tetsuo},
  title =	{{Improved Approximation Ratios for the Shortest Common Superstring Problem with Reverse Complements}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{15:1--15:11},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.15},
  URN =		{urn:nbn:de:0030-drops-259412},
  doi =		{10.4230/LIPIcs.CPM.2026.15},
  annote =	{Keywords: Shortest Common Superstring, Approximation Algorithms, DNA Sequencing}
}
Document
Flip Distance of Non-Crossing Spanning Trees: NP-Hardness and Improved Bounds

Authors: Håvard Bakke Bjerkevik, Joseph Dorfer, Linda Kleist, Torsten Ueckerdt, and Birgit Vogtenhuber

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)


Abstract
We consider the problem of reconfiguring non-crossing spanning trees on point sets. For a set P of n points in general position in the plane, the flip graph ℱ(P) has a vertex for each non-crossing spanning tree on P and an edge between any two spanning trees that can be transformed into each other by the exchange of a single edge (coined a flip). This flip graph has been intensively studied, lately with an emphasis on determining its diameter diam(ℱ(P)) for sets P of n points in convex position. For this case, the current best bounds are 14/9⋅n - O(1) ≤ diam(ℱ(P)) < 15/9⋅n - 3, obtained in a recent breakthrough work [Bjerkevik, Kleist, Ueckerdt, and Vogtenhuber; SODA 2025]. The crucial tool for both the upper and lower bound are so-called conflict graphs, which the authors stated might be the key ingredient for determining the diameter (up to lower-order terms). In this paper, we pick up the concept of conflict graphs from the above-mentioned work and show that this tool is even more versatile than previously hoped. As our first main result, we use conflict graphs to show that computing the flip distance between two non-crossing spanning trees is NP-hard, even for point sets in convex position. Interestingly, the result still holds for more constrained flip operations, concretely, compatible flips (where the removed and the added edge do not cross) and rotations (where the removed and the added edge share an endpoint). Additionally, we present new insights on the diameter of the flip graph, by this directly extending the line of research from [BKUV SODA25]. Their lower bound is based on a constant-size pair of trees, one of which is of a type we refer to as stacked. We show that if one of the trees is stacked, then the lower bound is indeed optimal up to a constant term, that is, there exists a flip sequence of length at most 14/9⋅(n-1) to any other tree. Lastly, we improve the lower bound on the diameter of the flip graph ℱ(P) for n points in convex position to 11/7⋅n-o(n).

Cite as

Håvard Bakke Bjerkevik, Joseph Dorfer, Linda Kleist, Torsten Ueckerdt, and Birgit Vogtenhuber. Flip Distance of Non-Crossing Spanning Trees: NP-Hardness and Improved Bounds. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 16:1-16:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{bjerkevik_et_al:LIPIcs.SoCG.2026.16,
  author =	{Bjerkevik, H\r{a}vard Bakke and Dorfer, Joseph and Kleist, Linda and Ueckerdt, Torsten and Vogtenhuber, Birgit},
  title =	{{Flip Distance of Non-Crossing Spanning Trees: NP-Hardness and Improved Bounds}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{16:1--16:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.16},
  URN =		{urn:nbn:de:0030-drops-258225},
  doi =		{10.4230/LIPIcs.SoCG.2026.16},
  annote =	{Keywords: Non-crossing, spanning tree, plane graph, flip graph, reconfiguration, diameter, complexity, NP-hard, edge exchange, compatible flip, rotation, happy edge property}
}
Document
Higher Hardness Results for the Reconfiguration of Odd Matchings

Authors: Joseph Dorfer

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)


Abstract
We study the reconfiguration of odd matchings of combinatorial graphs. Odd matchings are matchings that cover all but one vertex of a graph. A reconfiguration step, or flip, is an operation that matches the isolated vertex and, consequently, isolates another vertex. The flip graph of odd matchings is a graph that has all odd matchings of a graph as vertices and an edge between two vertices if their corresponding matchings can be transformed into one another via a single flip. We show that computing the diameter of the flip graph of odd matchings is Π₂^p-hard. This complements a recent result by Wulf [FOCS25] that it is Π₂^p-hard to compute the diameter of the flip graph of perfect matchings where a flip swaps matching edges along a single cycle of unbounded size. Further, we show that computing the radius of the flip graph of odd matchings is Σ₃^p-hard. The respective decision problems for the diameter and the radius are also complete in the respective level of the polynomial hierarchy. This shows that computing the radius of the flip graph of odd matchings is provably harder than computing its diameter, unless the polynomial hierarchy collapses. Finally, we reduce set cover to the problem of finding shortest flip sequences. As a consequence, we show APX-hardness and that the problem cannot be approximated by a sublogarithmic factor. By doing so, we answer a question asked by Aichholzer, Brenner, Dorfer, Hoang, Perz, Rieck, and Verciani [GD25].

Cite as

Joseph Dorfer. Higher Hardness Results for the Reconfiguration of Odd Matchings. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 33:1-33:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{dorfer:LIPIcs.STACS.2026.33,
  author =	{Dorfer, Joseph},
  title =	{{Higher Hardness Results for the Reconfiguration of Odd Matchings}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{33:1--33:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.33},
  URN =		{urn:nbn:de:0030-drops-255222},
  doi =		{10.4230/LIPIcs.STACS.2026.33},
  annote =	{Keywords: Graph Reconfiguration Problems, Flip Graphs, Polynomial Hierarchy, APX-hardness}
}
Document
Fixed-Parameter Tractable Submodular Maximization over a Matroid

Authors: Shamisa Nematollahi, Adrian Vladu, and Junyao Zhao

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
In this paper, we design fixed-parameter tractable (FPT) algorithms for (non-monotone) submodular maximization subject to a matroid constraint, where the matroid rank r is treated as a fixed parameter that is independent of the total number of elements n. We provide two FPT algorithms: one for the offline setting and another for the random-order streaming setting. Our streaming algorithm achieves a 1/2-ε approximation using Õ(r/poly(ε)) memory, while our offline algorithm obtains a 1-(1)/(e)-ε approximation with n⋅ 2^{Õ(r/poly(ε))} runtime and Õ(r/poly(ε)) memory. Both approximation factors are near-optimal in their respective settings, given existing hardness results. In particular, our offline algorithm demonstrates that - unlike in the polynomial-time regime - there is essentially no separation between monotone and non-monotone submodular maximization under a matroid constraint in the FPT framework.

Cite as

Shamisa Nematollahi, Adrian Vladu, and Junyao Zhao. Fixed-Parameter Tractable Submodular Maximization over a Matroid. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 105:1-105:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{nematollahi_et_al:LIPIcs.ITCS.2026.105,
  author =	{Nematollahi, Shamisa and Vladu, Adrian and Zhao, Junyao},
  title =	{{Fixed-Parameter Tractable Submodular Maximization over a Matroid}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{105:1--105:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.105},
  URN =		{urn:nbn:de:0030-drops-253924},
  doi =		{10.4230/LIPIcs.ITCS.2026.105},
  annote =	{Keywords: Submodular maximization, matroids, parameterized complexity, streaming algorithms}
}
Document
Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs

Authors: Takehiro Ito, Naonori Kakimura, Naoyuki Kamiyama, Yusuke Kobayashi, and Yoshio Okamoto

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
The minimum sum coloring problem with bundles was introduced by Darbouy and Friggstad (SWAT 2024) as a common generalization of the minimum coloring problem and the minimum sum coloring problem. During their presentation, the following open problem was raised: whether the minimum sum coloring problem with bundles could be solved in polynomial time for trees. We answer their question in the negative by proving that the minimum sum coloring problem with bundles is NP-hard even for paths. We complement this hardness by providing algorithms of the following types. First, we provide a fixed-parameter algorithm for trees when the number of bundles is a parameter; this can be extended to graphs of bounded treewidth. Second, we provide a polynomial-time algorithm for trees when bundles form a partition of the vertex set and the difference between the number of vertices and the number of bundles is constant. Third, we provide a polynomial-time algorithm for trees when bundles form a partition of the vertex set and each bundle induces a connected subgraph. We further show that for bipartite graphs, the problem with weights is NP-hard even when the number of bundles is at least three, but is polynomial-time solvable when the number of bundles is at most two. The threshold shifts to three versus four for the problem without weights.

Cite as

Takehiro Ito, Naonori Kakimura, Naoyuki Kamiyama, Yusuke Kobayashi, and Yoshio Okamoto. Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 40:1-40:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{ito_et_al:LIPIcs.ISAAC.2025.40,
  author =	{Ito, Takehiro and Kakimura, Naonori and Kamiyama, Naoyuki and Kobayashi, Yusuke and Okamoto, Yoshio},
  title =	{{Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{40:1--40:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.40},
  URN =		{urn:nbn:de:0030-drops-249482},
  doi =		{10.4230/LIPIcs.ISAAC.2025.40},
  annote =	{Keywords: graph algorithms, minimum sum coloring, minimum coloring, fixed-parameter tractability, NP-hardness}
}
Document
Reforming an Unfair Allocation by Exchanging Goods

Authors: Sheung Man Yuen, Ayumi Igarashi, Naoyuki Kamiyama, and Warut Suksompong

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
Fairly allocating indivisible goods is a frequently occurring task in everyday life. Given an initial allocation of the goods, we consider the problem of reforming it via a sequence of exchanges to attain fairness in the form of envy-freeness up to one good (EF1). We present a vast array of results on the complexity of determining whether it is possible to reach an EF1 allocation from the initial allocation and, if so, the minimum number of exchanges required. In particular, we uncover several distinctions based on the number of agents involved and their utility functions. Furthermore, we derive essentially tight bounds on the worst-case number of exchanges needed to achieve EF1.

Cite as

Sheung Man Yuen, Ayumi Igarashi, Naoyuki Kamiyama, and Warut Suksompong. Reforming an Unfair Allocation by Exchanging Goods. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 54:1-54:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{yuen_et_al:LIPIcs.ISAAC.2025.54,
  author =	{Yuen, Sheung Man and Igarashi, Ayumi and Kamiyama, Naoyuki and Suksompong, Warut},
  title =	{{Reforming an Unfair Allocation by Exchanging Goods}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{54:1--54:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.54},
  URN =		{urn:nbn:de:0030-drops-249626},
  doi =		{10.4230/LIPIcs.ISAAC.2025.54},
  annote =	{Keywords: fair division, indivisible goods, envy-freeness, exchanges}
}
Document
Improved Hardness-Of-Approximation for Token-Swapping

Authors: Sam Hiken and Nicole Wein

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
We study the token swapping problem, in which we are given a graph with an initial assignment of one distinct token to each vertex, and a final desired assignment (again with one token per vertex). The goal is to find the minimum length sequence of swaps of adjacent tokens required to get from the initial to the final assignment. The token swapping problem is known to be NP-complete. It is also known to have a polynomial-time 4-approximation algorithm. From the hardness-of-approximation side, it is known to be NP-hard to approximate with a ratio better than 1001/1000. Our main result is an improvement of the approximation ratio of the lower bound: We show that it is NP-hard to approximate with ratio better than 14/13. We then turn our attention to the 0/1-weighted version, in which every token has a weight of either 0 or 1, and the cost of a swap is the sum of the weights of the two participating tokens. Unlike standard token swapping, no constant-factor approximation is known for this version, and we provide an explanation. We prove that 0/1-weighted token swapping is NP-hard to approximate with ratio better than (1-ε) ln(n) for any constant ε > 0. Lastly, we prove two barrier results for the standard (unweighted) token swapping problem. We show that one cannot beat the current best known approximation ratio of 4 using a large class of algorithms which includes all known algorithms, nor can one beat it using a common analysis framework.

Cite as

Sam Hiken and Nicole Wein. Improved Hardness-Of-Approximation for Token-Swapping. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 57:1-57:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{hiken_et_al:LIPIcs.ESA.2025.57,
  author =	{Hiken, Sam and Wein, Nicole},
  title =	{{Improved Hardness-Of-Approximation for Token-Swapping}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{57:1--57:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.57},
  URN =		{urn:nbn:de:0030-drops-245251},
  doi =		{10.4230/LIPIcs.ESA.2025.57},
  annote =	{Keywords: algorithms, token-swapping, hardness-of-approximation, lower-bounds}
}
Document
Novel Complexity Results for Temporal Separators with Deadlines

Authors: Riccardo Dondi and Manuel Lafond

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
We consider two variants, (s,z,𝓁)-Temporal Separator and (s,z,𝓁)-Temporal Cut, respectively, of the vertex separator and the edge cut problem in temporal graphs. The goal is to remove the minimum number of vertices (temporal edges, respectively) in order to delete all the temporal paths that have time travel at most 𝓁 between a source vertex s and target vertex z. First, we solve an open problem in the literature showing that (s,z,𝓁)-Temporal Separator is NP-hard even when the underlying graph has pathwidth bounded by four. We complement this result showing that (s,z,𝓁)-Temporal Separator can be solved in polynomial time for graphs of pathwidth bounded by three. Then we consider the approximability of (s,z,𝓁)-Temporal Separator and we show that it cannot be approximated within factor 2^Ω(log^{1-ε}|V|) for any constant ε > 0, unless NP ⊆ ZPP (V is the vertex set of the input temporal graph) and that the strict version is approximable within factor 𝓁-1 (we show also that it is unliklely that this factor can be improved). Then we consider the (s,z,𝓁)-Temporal Cut problem, we show that it is APX-hard and we present a 2 log₂(2𝓁) approximation algorithm.

Cite as

Riccardo Dondi and Manuel Lafond. Novel Complexity Results for Temporal Separators with Deadlines. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 23:1-23:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{dondi_et_al:LIPIcs.WADS.2025.23,
  author =	{Dondi, Riccardo and Lafond, Manuel},
  title =	{{Novel Complexity Results for Temporal Separators with Deadlines}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{23:1--23:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.23},
  URN =		{urn:nbn:de:0030-drops-242545},
  doi =		{10.4230/LIPIcs.WADS.2025.23},
  annote =	{Keywords: Temporal Graphs, Graph Algorithms, Graph Separators, Parameterized Complexity, Approximation Complexity}
}
Document
Scheduling on Identical Machines with Setup Time and Unknown Execution Time

Authors: Yasushi Kawase, Kazuhisa Makino, Vinh Long Phan, and Hanna Sumita

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
In this study, we investigate a scheduling problem on identical machines in which jobs require initial setup before execution. We assume that an algorithm can dynamically form a batch (i.e., a collection of jobs to be processed together) from the remaining jobs. The setup time is modeled as a known monotone function of the set of jobs within a batch, while the execution time of each job remains unknown until completion. This uncertainty poses significant challenges for minimizing the makespan. We address these challenges by considering two scenarios: each job batch must be assigned to a single machine, or a batch may be distributed across multiple machines. For both scenarios, we analyze settings with and without preemption. Across these four settings, we design online algorithms that achieve asymptotically optimal competitive ratios with respect to both the number of jobs and the number of machines.

Cite as

Yasushi Kawase, Kazuhisa Makino, Vinh Long Phan, and Hanna Sumita. Scheduling on Identical Machines with Setup Time and Unknown Execution Time. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 41:1-41:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kawase_et_al:LIPIcs.WADS.2025.41,
  author =	{Kawase, Yasushi and Makino, Kazuhisa and Phan, Vinh Long and Sumita, Hanna},
  title =	{{Scheduling on Identical Machines with Setup Time and Unknown Execution Time}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{41:1--41:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.41},
  URN =		{urn:nbn:de:0030-drops-242728},
  doi =		{10.4230/LIPIcs.WADS.2025.41},
  annote =	{Keywords: Online scheduling, Competitive analysis, Makespan minimization, Identical machines scheduling}
}
Document
Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries

Authors: Tatsuya Terao

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)


Abstract
In the matroid intersection problem, we are given two matroids ℳ₁ = (V, ℐ₁) and ℳ₂ = (V, ℐ₂) defined on the same ground set V of n elements, and the objective is to find a common independent set S ∈ ℐ₁ ∩ ℐ₂ of largest possible cardinality, denoted by r. In this paper, we consider a deterministic matroid intersection algorithm with only a nearly linear number of independence oracle queries. Our contribution is to present a deterministic O(n/(ε) + r log r)-independence-query (2/3-ε)-approximation algorithm for any ε > 0. Our idea is very simple: we apply a recent Õ(n √r/ε)-independence-query (1 - ε)-approximation algorithm of Blikstad [ICALP 2021], but terminate it before completion. Moreover, we also present a semi-streaming algorithm for (2/3 -ε)-approximation of matroid intersection in O(1/ε) passes.

Cite as

Tatsuya Terao. Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 50:1-50:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{terao:LIPIcs.WADS.2025.50,
  author =	{Terao, Tatsuya},
  title =	{{Deterministic (2/3 - \epsilon)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{50:1--50:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.50},
  URN =		{urn:nbn:de:0030-drops-242812},
  doi =		{10.4230/LIPIcs.WADS.2025.50},
  annote =	{Keywords: Matroid intersection, approximation algorithm, streaming algorithm}
}
Document
Research
Subsequence-Based Indices for Genome Sequence Analysis

Authors: Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini

Published in: OASIcs, Volume 132, From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday (2025)


Abstract
Compact indices are a fundamental tool in string analysis, even more so in bioinformatics, where genomic sequences can reach billions in length. This paper presents some recent results in which Roberto Grossi has been involved, showing how some of these indices do more than just efficiently represent data, but rather are able to bring out salient information within it, which can be exploited for their downstream analysis. Specifically, we first review a recently-introduced method [Guerrini et al., 2023] that employs the Burrows-Wheeler Transform to build reasonably accurate phylogenetic trees in an assembly-free scenario. We then describe a recent practical tool [Buzzega et al., 2025] for indexing Maximal Common Subsequences between strings, which can enable analysis of genomic sequence similarity. Experimentally, we show that the results produced by the one index are consistent with the expectations about the results of the other index.

Cite as

Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini. Subsequence-Based Indices for Genome Sequence Analysis. In From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 132, pp. 20:1-20:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{buzzega_et_al:OASIcs.Grossi.20,
  author =	{Buzzega, Giovanni and Conte, Alessio and Guerrini, Veronica and Punzi, Giulia and Rosone, Giovanna and Tattini, Lorenzo},
  title =	{{Subsequence-Based Indices for Genome Sequence Analysis}},
  booktitle =	{From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday},
  pages =	{20:1--20:21},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-391-1},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{132},
  editor =	{Conte, Alessio and Marino, Andrea and Rosone, Giovanna and Vitter, Jeffrey Scott},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Grossi.20},
  URN =		{urn:nbn:de:0030-drops-238199},
  doi =		{10.4230/OASIcs.Grossi.20},
  annote =	{Keywords: String Indices, Burrows-Wheeler Transform, Maximal Common Subsequences, Sequence Analysis, Phylogeny}
}
Document
Track A: Algorithms, Complexity and Games
Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable

Authors: Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
An elimination tree of a connected graph G is a rooted tree on the vertices of G obtained by choosing a root v and recursing on the connected components of G-v to obtain the subtrees of v. The graph associahedron of G is a polytope whose vertices correspond to elimination trees of G and whose edges correspond to tree rotations, a natural operation between elimination trees. These objects generalize associahedra, which correspond to the case where G is a path. Ito et al. [ICALP 2023] recently proved that the problem of computing distances on graph associahedra is NP-hard. In this paper we prove that the problem, for a general graph G, is fixed-parameter tractable parameterized by the distance k. Prior to our work, only the case where G is a path was known to be fixed-parameter tractable. To prove our result, we use a novel approach based on a marking scheme that restricts the search to a set of vertices whose size is bounded by a (large) function of k.

Cite as

Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon. Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 63:1-63:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cunha_et_al:LIPIcs.ICALP.2025.63,
  author =	{Cunha, Lu{\'\i}s Felipe I. and Sau, Ignasi and Souza, U\'{e}verton S. and Valencia-Pabon, Mario},
  title =	{{Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{63:1--63:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.63},
  URN =		{urn:nbn:de:0030-drops-234408},
  doi =		{10.4230/LIPIcs.ICALP.2025.63},
  annote =	{Keywords: graph associahedra, elimination tree, rotation distance, parameterized complexity, fixed-parameter tractable algorithm, combinatorial shortest path, reconfiguration}
}
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