18 Search Results for "Souza, Alexander"

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Research
DOI: 10.4230/TGDK.4.1.3
Semantically Reflected Programs

Authors: Eduard Kamburjan, Vidar Norstein Klungre, Yuanwei Qu, Rudolf Schlatte, Egor V. Kostylev, Martin Giese, and Einar Broch Johnsen

Published in: TGDK, Volume 4, Issue 1 (2026). Transactions on Graph Data and Knowledge, Volume 4, Issue 1

Abstract
This paper addresses the dichotomy between the formalization of structural and the formalization of executable behavioral knowledge by means of semantically lifted programs, which explore an intuitive connection between imperative programs and knowledge graphs. While knowledge graphs and ontologies are eminently useful to represent formal knowledge about a system’s individuals and universals, programming languages are designed to describe the system’s evolution. To address this dichotomy, we introduce a semantic lifting of the program states of an executing progam into a knowledge graph, for an object-oriented programming language. The resulting graph is exposed as a semantic reflection layer within the programming language, allowing programmers to leverage knowledge of the application domain in their programs during execution. In this paper, we formalize semantic lifting and semantic reflection for a small imperative programming language, SMOL, explain the operational aspects of the language, and consider type correctness and virtualization for runtime program queries through the semantic reflection layer. We illustrate semantic lifting and semantic reflection through a case study of geological modeling and discuss different applications of the technique. The language implementation is open source and available online.
Cite as

Eduard Kamburjan, Vidar Norstein Klungre, Yuanwei Qu, Rudolf Schlatte, Egor V. Kostylev, Martin Giese, and Einar Broch Johnsen. Semantically Reflected Programs. In Transactions on Graph Data and Knowledge (TGDK), Volume 4, Issue 1, pp. 3:1-3:52, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@Article{kamburjan_et_al:TGDK.4.1.3,
  author =	{Kamburjan, Eduard and Klungre, Vidar Norstein and Qu, Yuanwei and Schlatte, Rudolf and Kostylev, Egor V. and Giese, Martin and Johnsen, Einar Broch},
  title =	{{Semantically Reflected Programs}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{3:1--3:52},
  ISSN =	{2942-7517},
  year =	{2026},
  volume =	{4},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.4.1.3},
  URN =		{urn:nbn:de:0030-drops-256884},
  doi =		{10.4230/TGDK.4.1.3},
  annote =	{Keywords: Knowledge Graphs, Ontologies, Object-Oriented Modelling, Imperative Programming Languages, Reflection, Type Safety}
}
Document
DOI: 10.4230/LIPIcs.IPEC.2025.4
On the Complexity of Secluded Path Problems

Authors: Tesshu Hanaka and Daisuke Tsuru

Published in: LIPIcs, Volume 358, 20th International Symposium on Parameterized and Exact Computation (IPEC 2025)

Abstract
This paper investigates the complexity of finding secluded paths in graphs. We focus on the Short Secluded Path problem and a natural new variant we introduce, Shortest Secluded Path. Formally, given an undirected graph G = (V, E), two vertices s,t ∈ V, and two integers k,l, the Short Secluded Path problem asks whether there exists an s-t path of length at most k with at most l neighbors. This problem is known to be computationally hard: it is W[1]-hard when parameterized by the path length k or by cliquewidth, and para-NP-complete when parameterized by the number l of neighbors. The fixed-parameter tractability is known for k+l or treewidth. In this paper, we expand the parameterized complexity landscape by designing (1) an XP algorithm parameterized by cliquewidth and (2) fixed-parameter algorithms parameterized by neighborhood diversity and twin cover number, respectively. As a byproduct, our results also provide parameterized algorithms for the classic s-t k-Path problem. Furthermore, we introduce the Shortest Secluded Path problem, which seeks a shortest s-t path with the minimum number of neighbors. In contrast to the hardness of the original problem, we reveal that this variant is solvable in polynomial time on unweighted graphs. We complete this by showing that for edge-weighted graphs, the problem becomes W[1]-hard yet remains in XP when parameterized by the shortest path distance between s and t.
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Tesshu Hanaka and Daisuke Tsuru. On the Complexity of Secluded Path Problems. In 20th International Symposium on Parameterized and Exact Computation (IPEC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 358, pp. 4:1-4:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{hanaka_et_al:LIPIcs.IPEC.2025.4,
  author =	{Hanaka, Tesshu and Tsuru, Daisuke},
  title =	{{On the Complexity of Secluded Path Problems}},
  booktitle =	{20th International Symposium on Parameterized and Exact Computation (IPEC 2025)},
  pages =	{4:1--4:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-407-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{358},
  editor =	{Agrawal, Akanksha and van Leeuwen, Erik Jan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2025.4},
  URN =		{urn:nbn:de:0030-drops-251361},
  doi =		{10.4230/LIPIcs.IPEC.2025.4},
  annote =	{Keywords: Secluded path, Parameterized complexity, Polynomial-time algorithm}
}
Document
DOI: 10.4230/OASIcs.ATMOS.2025.15
Exact and Heuristic Dynamic Taxi Sharing with Transfers Using Shortest-Path Speedup Techniques

Authors: Johannes Breitling and Moritz Laupichler

Published in: OASIcs, Volume 137, 25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025)

Abstract
We introduce a first-of-its-kind efficient, exact algorithm for the dynamic taxi-sharing problem with single-transfer journeys, i.e., a dispatcher that assigns traveler requests to a fleet of shared taxi-like vehicles allowing transfers between vehicles. We extend an existing no-transfer solution by collecting all viable pickup and dropoff vehicles for a request and computing the optimal transfer point for every pair of vehicles. We analyze underlying shortest-path problems and employ state-of-the-art routing algorithms to compute distances on-the-fly, which serves as the basis of dispatching requests with exact and up-to-date travel time information. We utilize constraints on existing routes, pruning techniques for transfer points, and both instruction- and thread-level parallelism to speed up the computation of the best assignment for every traveler. In addition to the exact variant, we propose a tunable heuristic approach that sacrifices solution quality in favor of improved running time. We evaluate our algorithm on a large road network with realistic input sets (up to 150000 requests). We demonstrate the effectiveness of our speedup techniques and the heuristic. We show first results on the benefits of transfers for taxi sharing on dense request sets, proving that our algorithm is well suited for the analysis of taxi sharing with transfers on large input instances.
Cite as

Johannes Breitling and Moritz Laupichler. Exact and Heuristic Dynamic Taxi Sharing with Transfers Using Shortest-Path Speedup Techniques. In 25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025). Open Access Series in Informatics (OASIcs), Volume 137, pp. 15:1-15:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{breitling_et_al:OASIcs.ATMOS.2025.15,
  author =	{Breitling, Johannes and Laupichler, Moritz},
  title =	{{Exact and Heuristic Dynamic Taxi Sharing with Transfers Using Shortest-Path Speedup Techniques}},
  booktitle =	{25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025)},
  pages =	{15:1--15:22},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-404-8},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{137},
  editor =	{Sauer, Jonas and Schmidt, Marie},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ATMOS.2025.15},
  URN =		{urn:nbn:de:0030-drops-247718},
  doi =		{10.4230/OASIcs.ATMOS.2025.15},
  annote =	{Keywords: Dynamic taxi sharing, ride pooling, dial-a-ride problem, transfers, route planning}
}
Document
DOI: 10.4230/OASIcs.ATMOS.2025.9
Speed-Aware Network Design: A Parametric Optimization Approach

Authors: Ugo Rosolia, Marc Bataillou Almagro, George Iosifidis, Martin Gross, and Georgios Paschos

Published in: OASIcs, Volume 137, 25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025)

Abstract
Network design problems have been studied from the 1950s, as they can be used in a wide range of real-world applications, e.g., design of communication and transportation networks. In classical network design problems, the objective is to minimize the cost of routing the demand flow through a graph. In this paper, we introduce a generalized version of such a problem, where the objective is to tradeoff routing costs and delivery speed; we introduce the concept of speed-coverage, which is defined as the number of unique items that can be sent to destinations in less than 1-day. Speed-coverage is a function of both the network design and the inventory stored at origin nodes, e.g., an item can be delivered in 1-day if it is in-stock at an origin that can reach a destination within 24 hours. Modeling inventory is inherently complex, since inventory coverage is described by an integer function with a large number of points (exponential to the number of origin sites), each one to be evaluated using historical data. To bypass this complexity, we first leverage a parametric optimization approach, which converts the non-linear joint routing and speed-coverage optimization problem into an equivalent mixed-integer linear program. Then, we propose a sampling strategy to avoid evaluating all the points of the speed-coverage function. The proposed method is evaluated on a series of numerical tests with representative scenarios and network sizes. We show that when considering the routing costs and monetary gains resulting from speed-coverage, our approach outperforms the baseline by 8.36% on average.
Cite as

Ugo Rosolia, Marc Bataillou Almagro, George Iosifidis, Martin Gross, and Georgios Paschos. Speed-Aware Network Design: A Parametric Optimization Approach. In 25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025). Open Access Series in Informatics (OASIcs), Volume 137, pp. 9:1-9:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{rosolia_et_al:OASIcs.ATMOS.2025.9,
  author =	{Rosolia, Ugo and Almagro, Marc Bataillou and Iosifidis, George and Gross, Martin and Paschos, Georgios},
  title =	{{Speed-Aware Network Design: A Parametric Optimization Approach}},
  booktitle =	{25th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2025)},
  pages =	{9:1--9:16},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-404-8},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{137},
  editor =	{Sauer, Jonas and Schmidt, Marie},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ATMOS.2025.9},
  URN =		{urn:nbn:de:0030-drops-247655},
  doi =		{10.4230/OASIcs.ATMOS.2025.9},
  annote =	{Keywords: Network Design, Transportation Networks, Mixed-Integer Programming, Speed-Coverage, Parametric Optimization}
}
Document
DOI: 10.4230/LIPIcs.AFT.2025.15
Beyond Optimal Fault-Tolerance

Authors: Andrew Lewis-Pye and Tim Roughgarden

Published in: LIPIcs, Volume 354, 7th Conference on Advances in Financial Technologies (AFT 2025)

Abstract
One of the most basic properties of a consensus protocol is its fault-tolerance - the maximum fraction of faulty participants that the protocol can tolerate without losing fundamental guarantees such as safety and liveness. Because of its importance, the optimal fault-tolerance achievable by any protocol has been characterized in a wide range of settings. For example, for state machine replication (SMR) protocols operating in the partially synchronous setting, it is possible to simultaneously guarantee consistency against α-bounded adversaries (i.e., adversaries that control less than an α fraction of the participants) and liveness against β-bounded adversaries if and only if α + 2β ≤ 1. This paper characterizes to what extent "better-than-optimal" fault-tolerance guarantees are possible for SMR protocols when the standard consistency requirement is relaxed to allow a bounded number r of consistency violations, each potentially leading to the rollback of recently finalized transactions. We prove that bounded rollback is impossible without additional timing assumptions and investigate protocols that tolerate and recover from consistency violations whenever message delays around the time of an attack are bounded by a parameter Δ^* (which may be arbitrarily larger than the parameter Δ that bounds post-GST message delays in the partially synchronous model). Here, a protocol’s fault-tolerance can be a non-constant function of r, and we prove, for each r, matching upper and lower bounds on the optimal "recoverable fault-tolerance" achievable by any SMR protocol. For example, for protocols that guarantee liveness against 1/3-bounded adversaries in the partially synchronous setting, a 5/9-bounded adversary can always cause one consistency violation but not two, and a 2/3-bounded adversary can always cause two consistency violations but not three. Our positive results are achieved through a generic "recovery procedure" that can be grafted on to any accountable SMR protocol and restores consistency following a violation while rolling back only transactions that were finalized in the previous 2Δ^* timesteps.
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Andrew Lewis-Pye and Tim Roughgarden. Beyond Optimal Fault-Tolerance. In 7th Conference on Advances in Financial Technologies (AFT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 354, pp. 15:1-15:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{lewispye_et_al:LIPIcs.AFT.2025.15,
  author =	{Lewis-Pye, Andrew and Roughgarden, Tim},
  title =	{{Beyond Optimal Fault-Tolerance}},
  booktitle =	{7th Conference on Advances in Financial Technologies (AFT 2025)},
  pages =	{15:1--15:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-400-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{354},
  editor =	{Avarikioti, Zeta and Christin, Nicolas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AFT.2025.15},
  URN =		{urn:nbn:de:0030-drops-247341},
  doi =		{10.4230/LIPIcs.AFT.2025.15},
  annote =	{Keywords: Distributed computing, consensus, recovery}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.7
Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion

Authors: Laure Morelle, Ignasi Sau, and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
A replacement action is a function ℒ that maps each graph H to a collection of graphs of size at most |V(H)|. Given a graph class ℋ, we consider a general family of graph modification problems, called ℒ-Replacement to ℋ, where the input is a graph G and the question is whether it is possible to replace some induced subgraph H₁ of G on at most k vertices by a graph H₂ in ℒ(H₁) so that the resulting graph belongs to ℋ. ℒ-Replacement to ℋ can simulate many graph modification problems including vertex deletion, edge deletion/addition/edition/contraction, vertex identification, subgraph complementation, independent set deletion, (induced) matching deletion/contraction, etc. We present two algorithms. The first one solves ℒ-Replacement to ℋ in time 2^poly(k) ⋅ |V(G)|² for every minor-closed graph class ℋ, where poly is a polynomial whose degree depends on ℋ, under a mild technical condition on ℒ. This generalizes the results of Morelle, Sau, Stamoulis, and Thilikos [ICALP 2020, ICALP 2023] for the particular case of Vertex Deletion to ℋ within the same running time. Our second algorithm is an improvement of the first one when ℋ is the class of graphs embeddable in a surface of Euler genus at most g and runs in time 2^𝒪(k⁹) ⋅ |V(G)|², where the 𝒪(⋅) notation depends on g. To the best of our knowledge, these are the first parameterized algorithms with a reasonable parametric dependence for such a general family of graph modification problems to minor-closed classes.
Cite as

Laure Morelle, Ignasi Sau, and Dimitrios M. Thilikos. Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 7:1-7:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{morelle_et_al:LIPIcs.ESA.2025.7,
  author =	{Morelle, Laure and Sau, Ignasi and Thilikos, Dimitrios M.},
  title =	{{Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{7:1--7:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.7},
  URN =		{urn:nbn:de:0030-drops-244751},
  doi =		{10.4230/LIPIcs.ESA.2025.7},
  annote =	{Keywords: Graph modification problems, Parameterized complexity, Graph minors, Flat Wall theorem, Irrelevant vertex technique, Algorithmic meta-theorem, Parametric dependence, Dynamic programming}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2025.66
Deciding Regular Games: a Playground for Exponential Time Algorithms

Authors: Zihui Liang, Bakh Khoussainov, and Mingyu Xiao

Published in: LIPIcs, Volume 345, 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)

Abstract
Regular games form a well-established class of games for analysis and synthesis of reactive systems. They include colored Muller games, McNaughton games, Muller games, Rabin games, and Streett games. These games are played on directed graphs G where Player 0 and Player 1 play by generating an infinite path ρ through the graph. The winner is determined by specifications put on the set X of vertices in ρ that occur infinitely often. These games are determined, enabling the partitioning of G into two sets Win₀ and Win₁ of winning positions for Player 0 and Player 1, respectively. Numerous algorithms exist that decide instances of regular games, e.g., Muller games, by computing Win₀ and Win₁. In this paper we aim to find general principles for designing uniform algorithms that decide all regular games. For this we utilize various recursive and dynamic programming algorithms that leverage standard notions such as subgames and traps. Importantly, we show that our techniques improve or match the performances of existing algorithms for many instances of regular games.
Cite as

Zihui Liang, Bakh Khoussainov, and Mingyu Xiao. Deciding Regular Games: a Playground for Exponential Time Algorithms. In 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 345, pp. 66:1-66:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{liang_et_al:LIPIcs.MFCS.2025.66,
  author =	{Liang, Zihui and Khoussainov, Bakh and Xiao, Mingyu},
  title =	{{Deciding Regular Games: a Playground for Exponential Time Algorithms}},
  booktitle =	{50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)},
  pages =	{66:1--66:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-388-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{345},
  editor =	{Gawrychowski, Pawe{\l} and Mazowiecki, Filip and Skrzypczak, Micha{\l}},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2025.66},
  URN =		{urn:nbn:de:0030-drops-241732},
  doi =		{10.4230/LIPIcs.MFCS.2025.66},
  annote =	{Keywords: Regular games, colored Muller games, Rabin games, McNaughton games, Muller games, deciding games}
}
Document
DOI: 10.4230/LIPIcs.CP.2025.20
Dependency-Curated Large Neighbourhood Search

Authors: Frej Knutar Lewander, Pierre Flener, and Justin Pearson

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)

Abstract
In large neighbourhood search (LNS), an incumbent initial solution is incrementally improved by selecting a subset of the variables, called the freeze set, and fixing them to their values in the incumbent solution, while a value for each remaining variable is found and assigned via solving (such as constraint programming-style propagation and search). Much research has been performed on finding generic and problem-specific LNS selection heuristics that select freeze sets that lead to high-quality solutions. In constraint-based local search (CBLS), the relations between the variables via the constraints are fundamental and well-studied, as they capture dependencies of the variables. In this paper, we apply these ideas from CBLS to the LNS context, presenting the novel dependency curation scheme, which exploits them to find a low-cardinality set of variables that the freeze set of any selection heuristic should be a subset of. The scheme often improves the overall performance of generic selection heuristics. Even when the scheme is used with a naïve generic selection heuristic that selects random freeze sets, the performance is competitive with more elaborate generic selection heuristics.
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Frej Knutar Lewander, Pierre Flener, and Justin Pearson. Dependency-Curated Large Neighbourhood Search. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 20:1-20:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{knutarlewander_et_al:LIPIcs.CP.2025.20,
  author =	{Knutar Lewander, Frej and Flener, Pierre and Pearson, Justin},
  title =	{{Dependency-Curated Large Neighbourhood Search}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{20:1--20:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.20},
  URN =		{urn:nbn:de:0030-drops-238810},
  doi =		{10.4230/LIPIcs.CP.2025.20},
  annote =	{Keywords: Combinatorial Optimisation, Large Neighbourhood Search (LNS), Constraint-Based Local Search (CBLS)}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.63
Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable

Authors: Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
An elimination tree of a connected graph G is a rooted tree on the vertices of G obtained by choosing a root v and recursing on the connected components of G-v to obtain the subtrees of v. The graph associahedron of G is a polytope whose vertices correspond to elimination trees of G and whose edges correspond to tree rotations, a natural operation between elimination trees. These objects generalize associahedra, which correspond to the case where G is a path. Ito et al. [ICALP 2023] recently proved that the problem of computing distances on graph associahedra is NP-hard. In this paper we prove that the problem, for a general graph G, is fixed-parameter tractable parameterized by the distance k. Prior to our work, only the case where G is a path was known to be fixed-parameter tractable. To prove our result, we use a novel approach based on a marking scheme that restricts the search to a set of vertices whose size is bounded by a (large) function of k.
Cite as

Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon. Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 63:1-63:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{cunha_et_al:LIPIcs.ICALP.2025.63,
  author =	{Cunha, Lu{\'\i}s Felipe I. and Sau, Ignasi and Souza, U\'{e}verton S. and Valencia-Pabon, Mario},
  title =	{{Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{63:1--63:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.63},
  URN =		{urn:nbn:de:0030-drops-234408},
  doi =		{10.4230/LIPIcs.ICALP.2025.63},
  annote =	{Keywords: graph associahedra, elimination tree, rotation distance, parameterized complexity, fixed-parameter tractable algorithm, combinatorial shortest path, reconfiguration}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2025.48
Exact Algorithms for Minimum Dilation Triangulation

Authors: Sándor P. Fekete, Phillip Keldenich, and Michael Perk

Published in: LIPIcs, Volume 332, 41st International Symposium on Computational Geometry (SoCG 2025)

Abstract
We provide a spectrum of new theoretical insights and practical results for finding a Minimum Dilation Triangulation (MDT), a natural geometric optimization problem of considerable previous attention: Given a set P of n points in the plane, find a triangulation T, such that a shortest Euclidean path in T between any pair of points increases by the smallest possible factor compared to their straight-line distance. No polynomial-time algorithm is known for the problem; moreover, evaluating the objective function involves computing the sum of (possibly many) square roots. On the other hand, the problem is not known to be NP-hard. (1) We provide practically robust methods and implementations for computing an MDT for benchmark sets with up to 30,000 points in reasonable time on commodity hardware, based on new geometric insights into the structure of optimal edge sets. Previous methods only achieved results for up to 200 points, so we extend the range of optimally solvable instances by a factor of 150. (2) We develop scalable techniques for accurately evaluating many shortest-path queries that arise as large-scale sums of square roots, allowing us to certify exact optimal solutions, with previous work relying on (possibly inaccurate) floating-point computations. (3) We resolve an open problem by establishing a lower bound of 1.44116 on the dilation of the regular 84-gon (and thus for arbitrary point sets), improving the previous worst-case lower bound of 1.4308 and greatly reducing the remaining gap to the upper bound of 1.4482 from the literature. In the process, we provide optimal solutions for regular n-gons up to n = 100.
Cite as

Sándor P. Fekete, Phillip Keldenich, and Michael Perk. Exact Algorithms for Minimum Dilation Triangulation. In 41st International Symposium on Computational Geometry (SoCG 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 332, pp. 48:1-48:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{fekete_et_al:LIPIcs.SoCG.2025.48,
  author =	{Fekete, S\'{a}ndor P. and Keldenich, Phillip and Perk, Michael},
  title =	{{Exact Algorithms for Minimum Dilation Triangulation}},
  booktitle =	{41st International Symposium on Computational Geometry (SoCG 2025)},
  pages =	{48:1--48:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-370-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{332},
  editor =	{Aichholzer, Oswin and Wang, Haitao},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2025.48},
  URN =		{urn:nbn:de:0030-drops-232006},
  doi =		{10.4230/LIPIcs.SoCG.2025.48},
  annote =	{Keywords: dilation, minimum dilation triangulation, exact algorithms, algorithm engineering, experimental evaluation}
}
Document
DOI: 10.4230/LIPIcs.STACS.2025.51
Protecting the Connectivity of a Graph Under Non-Uniform Edge Failures

Authors: Felix Hommelsheim, Zhenwei Liu, Nicole Megow, and Guochuan Zhang

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract
We study the problem of guaranteeing the connectivity of a given graph by protecting or strengthening edges. Herein, a protected edge is assumed to be robust and will not fail, which features a non-uniform failure model. We introduce the (p,q)-Steiner-Connectivity Preservation problem where we protect a minimum-cost set of edges such that the underlying graph maintains p-edge-connectivity between given terminal pairs against edge failures, assuming at most q unprotected edges can fail. We design polynomial-time exact algorithms for the cases where p and q are small and approximation algorithms for general values of p and q. Additionally, we show that when both p and q are part of the input, even deciding whether a given solution is feasible is NP-complete. This hardness also carries over to Flexible Network Design, a research direction that has gained significant attention. In particular, previous work focuses on problem settings where either p or q is constant, for which our new hardness result now provides justification.
Cite as

Felix Hommelsheim, Zhenwei Liu, Nicole Megow, and Guochuan Zhang. Protecting the Connectivity of a Graph Under Non-Uniform Edge Failures. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 51:1-51:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{hommelsheim_et_al:LIPIcs.STACS.2025.51,
  author =	{Hommelsheim, Felix and Liu, Zhenwei and Megow, Nicole and Zhang, Guochuan},
  title =	{{Protecting the Connectivity of a Graph Under Non-Uniform Edge Failures}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{51:1--51:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.51},
  URN =		{urn:nbn:de:0030-drops-228761},
  doi =		{10.4230/LIPIcs.STACS.2025.51},
  annote =	{Keywords: Network Design, Edge Failures, Graph Connectivity, Approximation Algorithms}
}
Document
Resource Paper
DOI: 10.4230/TGDK.2.2.7
Whelk: An OWL EL+RL Reasoner Enabling New Use Cases

Authors: James P. Balhoff and Christopher J. Mungall

Published in: TGDK, Volume 2, Issue 2 (2024): Special Issue on Resources for Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 2, Issue 2

Abstract
Many tasks in the biosciences rely on reasoning with large OWL terminologies (Tboxes), often combined with even larger databases. In particular, a common task is retrieval queries that utilize relational expressions; for example, “find all genes expressed in the brain or any part of the brain”. Automated reasoning on these ontologies typically relies on scalable reasoners targeting the EL subset of OWL, such as ELK. While the introduction of ELK has been transformative in the incorporation of reasoning into bio-ontology quality control and production pipelines, we have encountered limitations when applying it to use cases involving high throughput query answering or reasoning about datasets describing instances (Aboxes). Whelk is a fast OWL reasoner for combined EL+RL reasoning. As such, it is particularly useful for many biological ontology tasks, particularly those characterized by large Tboxes using the EL subset of OWL, combined with Aboxes targeting the RL subset of OWL. Whelk is implemented in Scala and utilizes immutable functional data structures, which provides advantages when performing incremental or dynamic reasoning tasks. Whelk supports querying complex class expressions at a substantially greater rate than ELK, and can answer queries or perform incremental reasoning tasks in parallel, enabling novel applications of OWL reasoning.
Cite as

James P. Balhoff and Christopher J. Mungall. Whelk: An OWL EL+RL Reasoner Enabling New Use Cases. In Special Issue on Resources for Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 2, pp. 7:1-7:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{balhoff_et_al:TGDK.2.2.7,
  author =	{Balhoff, James P. and Mungall, Christopher J.},
  title =	{{Whelk: An OWL EL+RL Reasoner Enabling New Use Cases}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{7:1--7:17},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{2},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.2.7},
  URN =		{urn:nbn:de:0030-drops-225918},
  doi =		{10.4230/TGDK.2.2.7},
  annote =	{Keywords: Web Ontology Language, OWL, Semantic Web, ontology, reasoner}
}
Document
Survey
DOI: 10.4230/TGDK.2.1.1
Towards Representing Processes and Reasoning with Process Descriptions on the Web

Authors: Andreas Harth, Tobias Käfer, Anisa Rula, Jean-Paul Calbimonte, Eduard Kamburjan, and Martin Giese

Published in: TGDK, Volume 2, Issue 1 (2024): Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge, Volume 2, Issue 1

Abstract
We work towards a vocabulary to represent processes and temporal logic specifications as graph-structured data. Different fields use incompatible terminologies for describing essentially the same process-related concepts. In addition, processes can be represented from different perspectives and levels of abstraction: both state-centric and event-centric perspectives offer distinct insights into the underlying processes. In this work, we strive to unify the representation of processes and related concepts by leveraging the power of knowledge graphs. We survey approaches to representing processes and reasoning with process descriptions from different fields and provide a selection of scenarios to help inform the scope of a unified representation of processes. We focus on processes that can be executed and observed via web interfaces. We propose to provide a representation designed to combine state-centric and event-centric perspectives while incorporating temporal querying and reasoning capabilities on temporal logic specifications. A standardised vocabulary and representation for processes and temporal specifications would contribute towards bridging the gap between the terminologies from different fields and fostering the broader application of methods involving temporal logics, such as formal verification and program synthesis.
Cite as

Andreas Harth, Tobias Käfer, Anisa Rula, Jean-Paul Calbimonte, Eduard Kamburjan, and Martin Giese. Towards Representing Processes and Reasoning with Process Descriptions on the Web. In Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 1, pp. 1:1-1:32, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{harth_et_al:TGDK.2.1.1,
  author =	{Harth, Andreas and K\"{a}fer, Tobias and Rula, Anisa and Calbimonte, Jean-Paul and Kamburjan, Eduard and Giese, Martin},
  title =	{{Towards Representing Processes and Reasoning with Process Descriptions on the Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{1:1--1:32},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.1.1},
  URN =		{urn:nbn:de:0030-drops-198583},
  doi =		{10.4230/TGDK.2.1.1},
  annote =	{Keywords: Process modelling, Process ontology, Temporal logic, Web services}
}
Document
Survey
DOI: 10.4230/TGDK.1.1.11
How Does Knowledge Evolve in Open Knowledge Graphs?

Authors: Axel Polleres, Romana Pernisch, Angela Bonifati, Daniele Dell'Aglio, Daniil Dobriy, Stefania Dumbrava, Lorena Etcheverry, Nicolas Ferranti, Katja Hose, Ernesto Jiménez-Ruiz, Matteo Lissandrini, Ansgar Scherp, Riccardo Tommasini, and Johannes Wachs

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
Openly available, collaboratively edited Knowledge Graphs (KGs) are key platforms for the collective management of evolving knowledge. The present work aims t o provide an analysis of the obstacles related to investigating and processing specifically this central aspect of evolution in KGs. To this end, we discuss (i) the dimensions of evolution in KGs, (ii) the observability of evolution in existing, open, collaboratively constructed Knowledge Graphs over time, and (iii) possible metrics to analyse this evolution. We provide an overview of relevant state-of-the-art research, ranging from metrics developed for Knowledge Graphs specifically to potential methods from related fields such as network science. Additionally, we discuss technical approaches - and their current limitations - related to storing, analysing and processing large and evolving KGs in terms of handling typical KG downstream tasks.
Cite as

Axel Polleres, Romana Pernisch, Angela Bonifati, Daniele Dell'Aglio, Daniil Dobriy, Stefania Dumbrava, Lorena Etcheverry, Nicolas Ferranti, Katja Hose, Ernesto Jiménez-Ruiz, Matteo Lissandrini, Ansgar Scherp, Riccardo Tommasini, and Johannes Wachs. How Does Knowledge Evolve in Open Knowledge Graphs?. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 11:1-11:59, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{polleres_et_al:TGDK.1.1.11,
  author =	{Polleres, Axel and Pernisch, Romana and Bonifati, Angela and Dell'Aglio, Daniele and Dobriy, Daniil and Dumbrava, Stefania and Etcheverry, Lorena and Ferranti, Nicolas and Hose, Katja and Jim\'{e}nez-Ruiz, Ernesto and Lissandrini, Matteo and Scherp, Ansgar and Tommasini, Riccardo and Wachs, Johannes},
  title =	{{How Does Knowledge Evolve in Open Knowledge Graphs?}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{11:1--11:59},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.11},
  URN =		{urn:nbn:de:0030-drops-194855},
  doi =		{10.4230/TGDK.1.1.11},
  annote =	{Keywords: KG evolution, temporal KG, versioned KG, dynamic KG}
}
Document
DOI: 10.4230/OASIcs.EVCS.2023.5
Spoofax at Oracle: Domain-Specific Language Engineering for Large-Scale Graph Analytics

Authors: Houda Boukham, Guido Wachsmuth, Toine Hartman, Hamza Boucherit, Oskar van Rest, Hassan Chafi, Sungpack Hong, Martijn Dwars, Arnaud Delamare, and Dalila Chiadmi

Published in: OASIcs, Volume 109, Eelco Visser Commemorative Symposium (EVCS 2023)

Abstract
For the last decade, teams at Oracle relied on the Spoofax language workbench to develop a family of domain-specific languages for graph analytics in research projects and in product development. In this paper, we analyze the requirements for integrating language processors into large-scale graph analytics toolkits and for the development of these language processors as part of a larger product development process. We discuss how Spoofax helps to meet these requirements and point out the need for future improvements.
Cite as

Houda Boukham, Guido Wachsmuth, Toine Hartman, Hamza Boucherit, Oskar van Rest, Hassan Chafi, Sungpack Hong, Martijn Dwars, Arnaud Delamare, and Dalila Chiadmi. Spoofax at Oracle: Domain-Specific Language Engineering for Large-Scale Graph Analytics. In Eelco Visser Commemorative Symposium (EVCS 2023). Open Access Series in Informatics (OASIcs), Volume 109, pp. 5:1-5:8, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@InProceedings{boukham_et_al:OASIcs.EVCS.2023.5,
  author =	{Boukham, Houda and Wachsmuth, Guido and Hartman, Toine and Boucherit, Hamza and van Rest, Oskar and Chafi, Hassan and Hong, Sungpack and Dwars, Martijn and Delamare, Arnaud and Chiadmi, Dalila},
  title =	{{Spoofax at Oracle: Domain-Specific Language Engineering for Large-Scale Graph Analytics}},
  booktitle =	{Eelco Visser Commemorative Symposium (EVCS 2023)},
  pages =	{5:1--5:8},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-267-9},
  ISSN =	{2190-6807},
  year =	{2023},
  volume =	{109},
  editor =	{L\"{a}mmel, Ralf and Mosses, Peter D. and Steimann, Friedrich},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.EVCS.2023.5},
  URN =		{urn:nbn:de:0030-drops-177756},
  doi =		{10.4230/OASIcs.EVCS.2023.5},
  annote =	{Keywords: language workbench, domain-specific language}
}
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