30 Search Results for "Wang, Qing"


Document
Research
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3


Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.

Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
Approximation Schemes for k-Subset Sum Ratio and k-Way Number Partitioning Ratio

Authors: Sotiris Kanellopoulos, Giorgos Mitropoulos, Antonis Antonopoulos, Nikos Leonardos, Aris Pagourtzis, Christos Pergaminelis, Stavros Petsalakis, and Kanellos Tsitouras

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
The Subset Sum Ratio problem (SSR) asks, given a multiset A of positive integers, to find two disjoint subsets of A such that the largest-to-smallest ratio of their sums is minimized. In this paper we study the k-version of SSR, namely k-Subset Sum Ratio (k-SSR), which asks to minimize the largest-to-smallest ratio of sums of k disjoint subsets of A. We develop an approximation scheme for k-SSR running in O(n^{2k}/ε^{k-1}) time, where n = |A| and ε is the error parameter. To the best of our knowledge, this is the first FPTAS for k-SSR for fixed k > 2. We also study the k-way Number Partitioning Ratio (k-PART) problem, which differs from k-SSR in that the k subsets must constitute a partition of A; this problem in fact corresponds to the objective of minimizing the largest-to-smallest sum ratio in the family of Multiway Number Partitioning problems. We present a more involved FPTAS for k-PART, also achieving O(n^{2k}/ε^{k-1}) time complexity. Notably, k-PART is also equivalent to the Minimum Envy-Ratio problem with identical valuation functions, which has been studied in the context of fair division of indivisible goods. Thus, for the case of identical valuations, our FPTAS represents a significant improvement over the O(n^{4k²+1}/ε^{2k²}) bound obtained by Nguyen and Rothe’s FPTAS [Trung Thanh Nguyen and Jörg Rothe, 2014] for Minimum Envy-Ratio with general additive valuations. Lastly, we propose a second FPTAS for k-SSR, which employs carefully designed calls to the first one; the new scheme has a time complexity of Õ(n/ε^{3k-1}), thus being much faster when n≫ 1/ ε.

Cite as

Sotiris Kanellopoulos, Giorgos Mitropoulos, Antonis Antonopoulos, Nikos Leonardos, Aris Pagourtzis, Christos Pergaminelis, Stavros Petsalakis, and Kanellos Tsitouras. Approximation Schemes for k-Subset Sum Ratio and k-Way Number Partitioning Ratio. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 44:1-44:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kanellopoulos_et_al:LIPIcs.ISAAC.2025.44,
  author =	{Kanellopoulos, Sotiris and Mitropoulos, Giorgos and Antonopoulos, Antonis and Leonardos, Nikos and Pagourtzis, Aris and Pergaminelis, Christos and Petsalakis, Stavros and Tsitouras, Kanellos},
  title =	{{Approximation Schemes for k-Subset Sum Ratio and k-Way Number Partitioning Ratio}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{44:1--44:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.44},
  URN =		{urn:nbn:de:0030-drops-249521},
  doi =		{10.4230/LIPIcs.ISAAC.2025.44},
  annote =	{Keywords: Fully polynomial-time approximation schemes, Subset Sum Ratio, Number Partitioning, Fair division, Envy minimization, Pseudo-polynomial time algorithms}
}
Document
PhD Panel
Unsupervised Multimodal Learning for Fault Diagnosis and Prognosis - Application to Radiotherapy Systems (PhD Panel)

Authors: Kélian Poujade, Louise Travé-Massuyès, Jérémy Pirard, and Laure Vieillevigne

Published in: OASIcs, Volume 136, 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)


Abstract
Modern complex systems, such as radiotherapy machines, require robust strategies for fault detection, diagnosis, and prognosis to ensure operational continuity and patient safety. While data-driven methods have gained traction, few studies address diagnostic and prognostic tasks using multimodal operational data under unsupervised or semi-supervised learning settings. This gap is particularly critical given the scarcity of labeled failure data in real-world environments. This work aims to design a unified approach for fault detection, diagnosis, and prognosis using multimodal data in the absence of complete labeling. To this end, autoencoders (AEs) are employed due to their suitability for unsupervised and self-supervised learning, flexibility in handling heterogeneous data, and ability to construct latent representations optimized for various downstream tasks. A specific implementation based on a Long Short-Term Memory β-Variational Autoencoder (LSTM-β-VAE) was developed to detect anomalies in machine logs. This framework is applied to TomoTherapy® systems - a highly complex and under-explored use case within the radiotherapy domain. Initial results demonstrate strong anomaly detection performance on both a public benchmark dataset (HDFS) and a proprietary dataset derived from real-world TomoTherapy® machine faults. Beyond methodology, the paper includes a concise literature review of multimodal learning and data-driven diagnosis and prognosis with a focus on AEs. Based on this review, key research directions are identified for the continuation of the thesis, especially the integration of explainable AI as a means to enhance diagnosis capabilities in the absence of labeled faults.

Cite as

Kélian Poujade, Louise Travé-Massuyès, Jérémy Pirard, and Laure Vieillevigne. Unsupervised Multimodal Learning for Fault Diagnosis and Prognosis - Application to Radiotherapy Systems (PhD Panel). In 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025). Open Access Series in Informatics (OASIcs), Volume 136, pp. 16:1-16:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{poujade_et_al:OASIcs.DX.2025.16,
  author =	{Poujade, K\'{e}lian and Trav\'{e}-Massuy\`{e}s, Louise and Pirard, J\'{e}r\'{e}my and Vieillevigne, Laure},
  title =	{{Unsupervised Multimodal Learning for Fault Diagnosis and Prognosis - Application to Radiotherapy Systems}},
  booktitle =	{36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)},
  pages =	{16:1--16:17},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-394-2},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{136},
  editor =	{Quinones-Grueiro, Marcos and Biswas, Gautam and Pill, Ingo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.DX.2025.16},
  URN =		{urn:nbn:de:0030-drops-248058},
  doi =		{10.4230/OASIcs.DX.2025.16},
  annote =	{Keywords: Artificial Intelligence, Diagnosis, Prognosis, Radiotherapy machines}
}
Document
GEMMA-FD: Zero-Shot Fault Detection in Heat Pumps Using Multimodal Language Models

Authors: Herbert Muehlburger and Franz Wotawa

Published in: OASIcs, Volume 136, 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)


Abstract
Fault detection in heating systems is critical for ensuring energy efficiency and operational reliability. Traditional approaches rely on labeled fault data and expert-defined rules, which are often unavailable or costly to obtain. We introduce GEMMA-FD (GEMMA for Fault Detection), a novel zero-shot framework for fault detection in heat pumps that leverages large language models (LLMs) without requiring labeled anomalies or predefined fault signatures. Our method transforms multivariate sensor time series into structured natural language prompts and augments them with visual features, such as line plots of key variables, to facilitate multimodal reasoning. Using GEMMA-3, an open-weight multimodal LLM, we classify heat pump system states as either normal or faulty. Experiments on a real-world heat pump dataset show that GEMMA-FD can identify unseen faults with reasonable precision, although its performance remains lower than a supervised XGBoost baseline trained on the same prompts. Specifically, GEMMA-FD achieves a macro-F1 score of 0.252, compared to 0.69 for XGBoost, underscoring the trade-off between generalization and targeted accuracy. Nevertheless, GEMMA-FD demonstrates the potential of foundation models for interpretable, multilingual fault detection in cyber-physical systems, while highlighting the need for prompt engineering, few-shot augmentation, and multimodal inputs to improve the classification of rare and complex fault types.

Cite as

Herbert Muehlburger and Franz Wotawa. GEMMA-FD: Zero-Shot Fault Detection in Heat Pumps Using Multimodal Language Models. In 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025). Open Access Series in Informatics (OASIcs), Volume 136, pp. 12:1-12:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{muehlburger_et_al:OASIcs.DX.2025.12,
  author =	{Muehlburger, Herbert and Wotawa, Franz},
  title =	{{GEMMA-FD: Zero-Shot Fault Detection in Heat Pumps Using Multimodal Language Models}},
  booktitle =	{36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)},
  pages =	{12:1--12:17},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-394-2},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{136},
  editor =	{Quinones-Grueiro, Marcos and Biswas, Gautam and Pill, Ingo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.DX.2025.12},
  URN =		{urn:nbn:de:0030-drops-248015},
  doi =		{10.4230/OASIcs.DX.2025.12},
  annote =	{Keywords: fault detection, anomaly detection, cyber-physical systems, HVAC, heat pumps, energy systems, large language models, zero-shot learning, open-weight LLMs, interpretable AI, multimodal prompts, smart energy}
}
Document
Survey
Resilience in Knowledge Graph Embeddings

Authors: Arnab Sharma, N'Dah Jean Kouagou, and Axel-Cyrille Ngonga Ngomo

Published in: TGDK, Volume 3, Issue 2 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 2


Abstract
In recent years, knowledge graphs have gained interest and witnessed widespread applications in various domains, such as information retrieval, question-answering, recommendation systems, amongst others. Large-scale knowledge graphs to this end have demonstrated their utility in effectively representing structured knowledge. To further facilitate the application of machine learning techniques, knowledge graph embedding models have been developed. Such models can transform entities and relationships within knowledge graphs into vectors. However, these embedding models often face challenges related to noise, missing information, distribution shift, adversarial attacks, etc. This can lead to sub-optimal embeddings and incorrect inferences, thereby negatively impacting downstream applications. While the existing literature has focused so far on adversarial attacks on KGE models, the challenges related to the other critical aspects remain unexplored. In this paper, we, first of all, give a unified definition of resilience, encompassing several factors such as generalisation, in-distribution generalization, distribution adaption, and robustness. After formalizing these concepts for machine learning in general, we define them in the context of knowledge graphs. To find the gap in the existing works on resilience in the context of knowledge graphs, we perform a systematic survey, taking into account all these aspects mentioned previously. Our survey results show that most of the existing works focus on a specific aspect of resilience, namely robustness. After categorizing such works based on their respective aspects of resilience, we discuss the challenges and future research directions.

Cite as

Arnab Sharma, N'Dah Jean Kouagou, and Axel-Cyrille Ngonga Ngomo. Resilience in Knowledge Graph Embeddings. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 2, pp. 1:1-1:38, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{sharma_et_al:TGDK.3.2.1,
  author =	{Sharma, Arnab and Kouagou, N'Dah Jean and Ngomo, Axel-Cyrille Ngonga},
  title =	{{Resilience in Knowledge Graph Embeddings}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{1:1--1:38},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{2},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.2.1},
  URN =		{urn:nbn:de:0030-drops-248117},
  doi =		{10.4230/TGDK.3.2.1},
  annote =	{Keywords: Knowledge graphs, Resilience, Robustness}
}
Document
On-Chain Decentralized Learning and Cost-Effective Inference for DeFi Attack Mitigation

Authors: Abdulrahman Alhaidari, Balaji Palanisamy, and Prashant Krishnamurthy

Published in: LIPIcs, Volume 354, 7th Conference on Advances in Financial Technologies (AFT 2025)


Abstract
Billions of dollars are lost every year in DeFi platforms by transactions exploiting business logic or accounting vulnerabilities. Existing defenses focus on static code analysis, public mempool screening, attacker contract detection, or trusted off-chain monitors, none of which prevents exploits submitted through private relays or malicious contracts that execute within the same block. We present the first decentralized, fully on-chain learning framework that: (i) performs gas-prohibitive computation on Layer-2 to reduce cost, (ii) propagates verified model updates to Layer-1, and (iii) enables gas-bounded, low-latency inference inside smart contracts. A novel Proof-of-Improvement (PoIm) protocol governs the training process and verifies each decentralized micro update as a self-verifying training transaction. Updates are accepted by PoIm only if they demonstrably improve at least one core metric (e.g., accuracy, F1-score, precision, or recall) on a public benchmark without degrading any of the other core metrics, while adversarial proposals get financially penalized through an adaptable test set for evolving threats. We develop quantization and loop-unrolling techniques that enable inference for logistic regression, SVM, MLPs, CNNs, and gated RNNs (with support for formally verified decision tree inference) within the Ethereum block gas limit, while remaining bit-exact to their off-chain counterparts, formally proven in Z3. We curate 298 unique real-world exploits (2020 - 2025) with 402 exploit transactions across eight EVM chains, collectively responsible for $3.74 B in losses. We demonstrate that on-chain ML governed by PoIm detects previously unseen attacks with over 97% attack detection accuracy and 82.0% F1. A single inference, such as one made via an external call, typically incurs zero cost. Fully on-chain inference consumes 57,603 gas (≈ $0.18) for linear models, 143,647 gas (≈ $0.49) for CNN(F2, K1), and 506,397 gas (≈ $1.77) for CNN(F8, K4) on L1 (e.g., Ethereum). Our results show that practical and continually evolving DeFi defenses can be embedded directly in protocol logic without trusted guardians, and our solution achieves highly cost-effective protection while filling a critical gap between vulnerability scanners and real-time transaction screening.

Cite as

Abdulrahman Alhaidari, Balaji Palanisamy, and Prashant Krishnamurthy. On-Chain Decentralized Learning and Cost-Effective Inference for DeFi Attack Mitigation. In 7th Conference on Advances in Financial Technologies (AFT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 354, pp. 35:1-35:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{alhaidari_et_al:LIPIcs.AFT.2025.35,
  author =	{Alhaidari, Abdulrahman and Palanisamy, Balaji and Krishnamurthy, Prashant},
  title =	{{On-Chain Decentralized Learning and Cost-Effective Inference for DeFi Attack Mitigation}},
  booktitle =	{7th Conference on Advances in Financial Technologies (AFT 2025)},
  pages =	{35:1--35:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-400-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{354},
  editor =	{Avarikioti, Zeta and Christin, Nicolas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AFT.2025.35},
  URN =		{urn:nbn:de:0030-drops-247548},
  doi =		{10.4230/LIPIcs.AFT.2025.35},
  annote =	{Keywords: DeFi attacks, on-chain machine learning, decentralized learning, real-time defense}
}
Document
Compact Representation of Semilinear and Terrain-Like Graphs

Authors: Jean Cardinal and Yelena Yuditsky

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
We consider the existence and construction of biclique covers of graphs, consisting of coverings of their edge sets by complete bipartite graphs. The size of such a cover is the sum of the sizes of the bicliques. Small-size biclique covers of graphs are ubiquitous in computational geometry, and have been shown to be useful compact representations of graphs. We give a brief survey of classical and recent results on biclique covers and their applications, and give new families of graphs having biclique covers of near-linear size. In particular, we show that semilinear graphs, whose edges are defined by linear relations in bounded dimensional space, always have biclique covers of size O(npolylog n). This generalizes many previously known results on special classes of graphs including interval graphs, permutation graphs, and graphs of bounded boxicity, but also new classes such as intersection graphs of L-shapes in the plane. It also directly implies the bounds for Zarankiewicz’s problem derived by Basit, Chernikov, Starchenko, Tao, and Tran (Forum Math. Sigma, 2021). We also consider capped graphs, also known as terrain-like graphs, defined as ordered graphs forbidding a certain ordered pattern on four vertices. Terrain-like graphs contain the induced subgraphs of terrain visibility graphs. We give an elementary proof that these graphs admit biclique partitions of size O(nlog³ n). This provides a simple combinatorial analogue of a classical result from Agarwal, Alon, Aronov, and Suri on polygon visibility graphs (Discrete Comput. Geom. 1994). Finally, we prove that there exists families of unit disk graphs on n vertices that do not admit biclique coverings of size o(n^{4/3}), showing that we are unlikely to improve on Szemerédi-Trotter type incidence bounds for higher-degree semialgebraic graphs.

Cite as

Jean Cardinal and Yelena Yuditsky. Compact Representation of Semilinear and Terrain-Like Graphs. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 67:1-67:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cardinal_et_al:LIPIcs.ESA.2025.67,
  author =	{Cardinal, Jean and Yuditsky, Yelena},
  title =	{{Compact Representation of Semilinear and Terrain-Like Graphs}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{67:1--67:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.67},
  URN =		{urn:nbn:de:0030-drops-245359},
  doi =		{10.4230/LIPIcs.ESA.2025.67},
  annote =	{Keywords: Biclique covers, intersection graphs, visibility graphs, Zarankiewicz’s problem}
}
Document
In-Browser C++ Interpreter for Lightweight Intelligent Programming Learning Environments

Authors: Tomas Blažauskas, Arnoldas Rauba, Jakub Swacha, Raffaele Montella, and Rytis Maskeliunas

Published in: OASIcs, Volume 133, 6th International Computer Programming Education Conference (ICPEC 2025)


Abstract
The paper presents a browser native C++ interpreter integrated into an AI-assisted educational platform designed to enhance programming learning in formal education. The interpreter leverages Parsing Expression Grammars (PEG) to generate Abstract Syntax Trees (AST) and executes C++ code using a TypeScript-based runtime. The system supports key C++ features, including pointer arithmetic, function overloading, and namespace resolution, and emulates memory management via reference-counted JavaScript objects. Integrated within a web-based learning environment, it provides automated feedback, error explanations, and code quality evaluations. The evaluation involved 4582 students in three difficulty levels and feedback from 14 teachers. The results include high system usability scale (SUS) scores (avg. 83.5) and WBLT learning effectiveness scores (avg. 4.58/5). Interpreter performance testing in 65 cases averaged under 10 ms per task, confirming its practical applicability to school curricula. The system supports SCORM and PWA deployment, enabling LMS-independent usage. The work introduces a technical innovation in browser-based C++ execution and a scalable framework for LLM-enhanced programming pedagogy.

Cite as

Tomas Blažauskas, Arnoldas Rauba, Jakub Swacha, Raffaele Montella, and Rytis Maskeliunas. In-Browser C++ Interpreter for Lightweight Intelligent Programming Learning Environments. In 6th International Computer Programming Education Conference (ICPEC 2025). Open Access Series in Informatics (OASIcs), Volume 133, pp. 14:1-14:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{blazauskas_et_al:OASIcs.ICPEC.2025.14,
  author =	{Bla\v{z}auskas, Tomas and Rauba, Arnoldas and Swacha, Jakub and Montella, Raffaele and Maskeliunas, Rytis},
  title =	{{In-Browser C++ Interpreter for Lightweight Intelligent Programming Learning Environments}},
  booktitle =	{6th International Computer Programming Education Conference (ICPEC 2025)},
  pages =	{14:1--14:15},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-393-5},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{133},
  editor =	{Queir\'{o}s, Ricardo and Pinto, M\'{a}rio and Portela, Filipe and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ICPEC.2025.14},
  URN =		{urn:nbn:de:0030-drops-240449},
  doi =		{10.4230/OASIcs.ICPEC.2025.14},
  annote =	{Keywords: C++ interpreter, browser-based execution, programming education, LLM-assisted learning, PEG, AST, TypeScript runtime}
}
Document
Are We There Yet? On Security Vulnerabilities Produced by Open Source Generative AI Models and Its Implications for Security Education

Authors: Maria Camila Santos Galeano, Tiago Espinha Gasiba, Sathwik Amburi, and Maria Pinto-Albuquerque

Published in: OASIcs, Volume 133, 6th International Computer Programming Education Conference (ICPEC 2025)


Abstract
With the increasing integration of large language models (LLMs) into software development and programming education, concerns have emerged about the security of AI-generated code. This study investigates the security of three open source code generation models. Codestral, DeepSeek R1, and LLaMA 3.3 70B using structured prompts in Python, C, and Java. Some prompts were designed to explicitly trigger known vulnerability patterns, such as unsanitized input handling or unsafe memory operations, in order to assess how each model responds to security-sensitive tasks. The findings reveal recurring issues, including command execution vulnerabilities, insecure memory handling, and insufficient input validation. In response, we propose a set of recommendations for integrating secure prompt design and code auditing practices into developer training. These guidelines aim to help future developers generate safer code and better identify flaws in GenAI-generated output. This work offers an initial analysis of the limitations of GenAI-assisted code generation and provides actionable strategies to support the more secure and responsible use of these tools in professional and educational contexts.

Cite as

Maria Camila Santos Galeano, Tiago Espinha Gasiba, Sathwik Amburi, and Maria Pinto-Albuquerque. Are We There Yet? On Security Vulnerabilities Produced by Open Source Generative AI Models and Its Implications for Security Education. In 6th International Computer Programming Education Conference (ICPEC 2025). Open Access Series in Informatics (OASIcs), Volume 133, pp. 9:1-9:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{santosgaleano_et_al:OASIcs.ICPEC.2025.9,
  author =	{Santos Galeano, Maria Camila and Espinha Gasiba, Tiago and Amburi, Sathwik and Pinto-Albuquerque, Maria},
  title =	{{Are We There Yet? On Security Vulnerabilities Produced by Open Source Generative AI Models and Its Implications for Security Education}},
  booktitle =	{6th International Computer Programming Education Conference (ICPEC 2025)},
  pages =	{9:1--9:12},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-393-5},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{133},
  editor =	{Queir\'{o}s, Ricardo and Pinto, M\'{a}rio and Portela, Filipe and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ICPEC.2025.9},
  URN =		{urn:nbn:de:0030-drops-240395},
  doi =		{10.4230/OASIcs.ICPEC.2025.9},
  annote =	{Keywords: Generative AI, Code Security, Programming Education, Prompt Engineering, Secure Coding, Static Analysis}
}
Document
A Coupled Reconfiguration Mechanism That Enables Powerful, Pseudoknot-Robust DNA Strand Displacement Devices with 2-Stranded Inputs

Authors: Hope Amber Johnson and Anne Condon

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)


Abstract
DNA strand displacement, a collective name for certain behaviors of short strands of DNA, has been used to build many interesting molecular devices over the past few decades. Among those devices are general implementation schemes for Chemical Reaction Networks, suggesting a place in an abstraction hierarchy for complex molecular programming. However, the possibilities of DNA strand displacement are far from fully explored. On a theoretical level, most DNA strand displacement systems are built out of a few simple motifs, with the space of possible motifs otherwise unexplored. On a practical level, the desire for general, large-scale DNA strand displacement systems is not fulfilled. Those systems that are scalable are not general, and those that are general don't scale up well. We have recently been exploring the space of possibilities for DNA strand displacement systems where all input complexes are made out of at most two strands of DNA. As a test case, we've had an open question of whether such systems can implement general Chemical Reaction Networks, in a way that has a certain set of other desirable properties - reversible, systematic, O(1) toeholds, bimolecular reactions, and correct according to CRN bisimulation - that the state-of-the-art implementations with more than 2-stranded inputs have. Until now we've had a few results that have all but one of those desirable properties, including one based on a novel mechanism we called coupled reconfiguration, but that depended on the physically questionable assumption that pseudoknots cannot occur. We wondered whether the same type of mechanism could be done in a pseudoknot-robust way. In this work we show that in fact, coupled reconfiguration can be done in a pseudoknot-robust way, and this mechanism can implement general Chemical Reaction Networks with all inputs being single strands of DNA. Going further, the same motifs used in this mechanism can implement stacks and surface-based bimolecular reactions. Those have been previously studied as part of polymer extensions of the Chemical Reaction Network model, and on an abstract model level, the resulting extensions are Turing-complete in ways the base Chemical Reaction Network model is not. Our mechanisms are significantly different from previously tested DNA strand displacement systems, which raises questions about their ability to be implemented experimentally, but we have some reasons to believe the challenges are solvable. So we present the pseudoknot-robust coupled reconfiguration mechanism and its use for general Chemical Reaction Network implementations; we present the extensions of the mechanism to stack and surface reactions; and we discuss the possible obstacles and solutions to experimental implementation, as well as the theoretical implications of this mechanism.

Cite as

Hope Amber Johnson and Anne Condon. A Coupled Reconfiguration Mechanism That Enables Powerful, Pseudoknot-Robust DNA Strand Displacement Devices with 2-Stranded Inputs. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 2:1-2:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{johnson_et_al:LIPIcs.DNA.31.2,
  author =	{Johnson, Hope Amber and Condon, Anne},
  title =	{{A Coupled Reconfiguration Mechanism That Enables Powerful, Pseudoknot-Robust DNA Strand Displacement Devices with 2-Stranded Inputs}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{2:1--2:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.2},
  URN =		{urn:nbn:de:0030-drops-238514},
  doi =		{10.4230/LIPIcs.DNA.31.2},
  annote =	{Keywords: Molecular programming, DNA strand displacement, Chemical Reaction Networks}
}
Document
MODAP: A Multi-City Open Data & Analytics Platform for Micromobility Research

Authors: Grant McKenzie

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)


Abstract
Over the past decade, micromobility services, particularly electric vehicles for personal short-distance trips, have experienced significant growth. Major cities around the world now host extensive fleets of vehicles available for short-term public rental. While previous research has examined usage patterns within and between a few select cities, large, open, and publicly accessible data sets for analyzing mobility across multiple cities are extremely limited. I have collected, curated, and aggregated over twenty million e-scooter and e-bicycle trips across five major cities and are openly releasing aggregated data for use by mobility and sustainable transport researchers, urban planners, and policymakers. To accompany these data, I developed MODAP (Micromobility Open Data & Analytics Platform), a geovisual analytics tool that empowers researchers to explore the temporal and regional patterns of e-mobility trips within our open data set and download the data for offline analysis. My objective is to foster further research into city-scale mobility patterns and to equip researchers, community members, and policymakers with the necessary tools to conduct this work.

Cite as

Grant McKenzie. MODAP: A Multi-City Open Data & Analytics Platform for Micromobility Research. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 6:1-6:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{mckenzie:LIPIcs.GIScience.2025.6,
  author =	{McKenzie, Grant},
  title =	{{MODAP: A Multi-City Open Data \& Analytics Platform for Micromobility Research}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{6:1--6:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.6},
  URN =		{urn:nbn:de:0030-drops-238353},
  doi =		{10.4230/LIPIcs.GIScience.2025.6},
  annote =	{Keywords: open data, mobility, geovisualization, micromobility}
}
Document
Learning to Bound for Maximum Common Subgraph Algorithms

Authors: Buddhi W. Kothalawala, Henning Koehler, and Qing Wang

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)


Abstract
Identifying the maximum common subgraph between two graphs is a computationally challenging NP-hard problem. While the McSplit algorithm represents a state-of-the-art approach within a branch-and-bound (BnB) framework, several extensions have been proposed to enhance its vertex pair selection strategy, often utilizing reinforcement learning techniques. Nonetheless, the quality of the upper bound remains a critical factor in accelerating the search process by effectively pruning unpromising branches. This research introduces a novel, more restrictive upper bound derived from a detailed analysis of the McSplit algorithm’s generated partitions. To enhance the effectiveness of this bound, we propose a reinforcement learning approach that strategically directs computational effort towards the most promising regions within the search space.

Cite as

Buddhi W. Kothalawala, Henning Koehler, and Qing Wang. Learning to Bound for Maximum Common Subgraph Algorithms. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 22:1-22:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kothalawala_et_al:LIPIcs.CP.2025.22,
  author =	{Kothalawala, Buddhi W. and Koehler, Henning and Wang, Qing},
  title =	{{Learning to Bound for Maximum Common Subgraph Algorithms}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{22:1--22:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.22},
  URN =		{urn:nbn:de:0030-drops-238837},
  doi =		{10.4230/LIPIcs.CP.2025.22},
  annote =	{Keywords: Combinatorial Search, Branch and Bound, Graph Theory}
}
Document
Algorithms for Computing Very Large BWTs: a Short Survey

Authors: Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone

Published in: OASIcs, Volume 131, The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday (2025)


Abstract
The Burrows-Wheeler Transform (BWT) is a fundamental string transformation that, although initially introduced for data compression, has been extensively utilized across various domains, including text indexing and pattern matching within large datasets. Although the BWT construction is linear, the constants make the task impractical for large datasets, and as highlighted by Ferragina et al. [Paolo Ferragina et al., 2012], "to use it, one must first build it!". Thus, the construction of the BWT remains a significant challenge. For these reasons, during the past three decades there has been a succession of new algorithms for its construction using techniques that work in external memory or that use text compression. In this survey, we revise some of the most important advancements and tools presented in the past years for computing large BWTs exploiting external memory or text compression approaches without using additional information about the data.

Cite as

Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, and Giovanna Rosone. Algorithms for Computing Very Large BWTs: a Short Survey. In The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 131, pp. 7:1-7:28, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{diazdominguez_et_al:OASIcs.Manzini.7,
  author =	{D{\'\i}az-Dom{\'\i}nguez, Diego and Egidi, Lavinia and Guerrini, Veronica and Louza, Felipe A. and Rosone, Giovanna},
  title =	{{Algorithms for Computing Very Large BWTs: a Short Survey}},
  booktitle =	{The Expanding World of Compressed Data: A Festschrift for Giovanni Manzini's 60th Birthday},
  pages =	{7:1--7:28},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-390-4},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{131},
  editor =	{Ferragina, Paolo and Gagie, Travis and Navarro, Gonzalo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Manzini.7},
  URN =		{urn:nbn:de:0030-drops-239151},
  doi =		{10.4230/OASIcs.Manzini.7},
  annote =	{Keywords: Burrows-Wheeler transform, Extended Burrows-Wheeler transform, external memory, text compression, longest common prefix}
}
Document
Incremental Reachability Index

Authors: Laurent Bulteau, Pierre-Yves David, Florian Horn, and Euxane Tran-Girard

Published in: LIPIcs, Volume 338, 23rd International Symposium on Experimental Algorithms (SEA 2025)


Abstract
We study the reachability problem in append-only DAGs: given two nodes u and v, is there a path from u to v? While the problem is linear in general, it can be answered faster by using a precomputed index, which gives a compressed representation of the transitive closure of the graph. Index algorithms are evaluated on three dimensions: the query time that the algorithm needs to answer whether there is a path from one node to another, the memory that the index uses per node, and the indexing time that is required to update the index when a node is added to the graph. In this paper, we combine Jagadish’s static index [Jagadish, 1990] with Felsner’s online chain-decomposition algorithm [Stefan Felsner, 1997] to create an incremental index: data associated with a node is immutable, guaranteeing that queries are answered properly even if new nodes are inserted while the query is processed. Its query time is constant, but its index size is heavily dependent on the graph width, and as such is not competitive with recent indexing algorithms (2-hop, tree-chain, ...). We also propose a version of that incremental algorithm with a much lighter index. In the most compressed version, the query time becomes O(log n). However, constant-time queries can be retained depending on the desired time/memory trade-off.

Cite as

Laurent Bulteau, Pierre-Yves David, Florian Horn, and Euxane Tran-Girard. Incremental Reachability Index. In 23rd International Symposium on Experimental Algorithms (SEA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 338, pp. 9:1-9:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bulteau_et_al:LIPIcs.SEA.2025.9,
  author =	{Bulteau, Laurent and David, Pierre-Yves and Horn, Florian and Tran-Girard, Euxane},
  title =	{{Incremental Reachability Index}},
  booktitle =	{23rd International Symposium on Experimental Algorithms (SEA 2025)},
  pages =	{9:1--9:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-375-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{338},
  editor =	{Mutzel, Petra and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2025.9},
  URN =		{urn:nbn:de:0030-drops-232477},
  doi =		{10.4230/LIPIcs.SEA.2025.9},
  annote =	{Keywords: Directed acyclic graphs, reachability, append-only, index}
}
Document
Detecting Functionality-Specific Vulnerabilities via Retrieving Individual Functionality-Equivalent APIs in Open-Source Repositories

Authors: Tianyu Chen, Zeyu Wang, Lin Li, Ding Li, Zongyang Li, Xiaoning Chang, Pan Bian, Guangtai Liang, Qianxiang Wang, and Tao Xie

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)


Abstract
Functionality-specific vulnerabilities, which mainly occur in Application Programming Interfaces (APIs) with specific functionalities, are crucial for software developers to detect and avoid. When detecting individual functionality-specific vulnerabilities, the existing two categories of approaches are ineffective because they consider only the API bodies and are unable to handle diverse implementations of functionality-equivalent APIs. To effectively detect functionality-specific vulnerabilities, we propose APISS, the first approach to utilize API doc strings and signatures instead of API bodies. APISS first retrieves functionality-equivalent APIs for APIs with existing vulnerabilities and then migrates Proof-of-Concepts (PoCs) of the existing vulnerabilities for newly detected vulnerable APIs. To retrieve functionality-equivalent APIs, we leverage a Large Language Model for API embedding to improve the accuracy and address the effectiveness and scalability issues suffered by the existing approaches. To migrate PoCs of the existing vulnerabilities for newly detected vulnerable APIs, we design a semi-automatic schema to substantially reduce manual costs. We conduct a comprehensive evaluation to empirically compare APISS with four state-of-the-art approaches of detecting vulnerabilities and two state-of-the-art approaches of retrieving functionality-equivalent APIs. The evaluation subjects include 180 widely used Java repositories using 10 existing vulnerabilities, along with their PoCs. The results show that APISS effectively retrieves functionality-equivalent APIs, achieving a Top-1 Accuracy of 0.81 while the best of the baselines under comparison achieves only 0.55. APISS is highly efficient: the manual costs are within 10 minutes per vulnerability and the end-to-end runtime overhead of testing one candidate API is less than 2 hours. APISS detects 179 new vulnerabilities and receives 60 new CVE IDs, bringing high value to security practice.

Cite as

Tianyu Chen, Zeyu Wang, Lin Li, Ding Li, Zongyang Li, Xiaoning Chang, Pan Bian, Guangtai Liang, Qianxiang Wang, and Tao Xie. Detecting Functionality-Specific Vulnerabilities via Retrieving Individual Functionality-Equivalent APIs in Open-Source Repositories. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 6:1-6:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{chen_et_al:LIPIcs.ECOOP.2025.6,
  author =	{Chen, Tianyu and Wang, Zeyu and Li, Lin and Li, Ding and Li, Zongyang and Chang, Xiaoning and Bian, Pan and Liang, Guangtai and Wang, Qianxiang and Xie, Tao},
  title =	{{Detecting Functionality-Specific Vulnerabilities via Retrieving Individual Functionality-Equivalent APIs in Open-Source Repositories}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{6:1--6:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.6},
  URN =		{urn:nbn:de:0030-drops-232999},
  doi =		{10.4230/LIPIcs.ECOOP.2025.6},
  annote =	{Keywords: Application Security, Vulnerability Detection, Large Language Model}
}
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