22 Search Results for "Gupta, Siddharth"

Document
DOI: 10.4230/LIPIcs.ESA.2025.55
Safe Sequences via Dominators in DAGs for Path-Covering Problems

Authors: Francisco Sena, Romeo Rizzi, and Alexandru I. Tomescu

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
A path-covering problem on a directed acyclic graph (DAG) requires finding a set of source-to-sink paths that cover all the nodes, all the arcs, or subsets thereof, and additionally they are optimal with respect to some function. In this paper we study safe sequences of nodes or arcs, namely sequences that appear in some path of every path cover of a DAG. We show that safe sequences admit a simple characterization via cutnodes. Moreover, we establish a connection between maximal safe sequences and leaf-to-root paths in the source- and sink-dominator trees of the DAG, which may be of independent interest in the extensive literature on dominators. With dominator trees, safe sequences admit an O(n)-size representation and a linear-time output-sensitive enumeration algorithm running in time O(m + o), where n and m are the number of nodes and arcs, respectively, and o is the total length of the maximal safe sequences. We then apply maximal safe sequences to simplify Integer Linear Programs (ILPs) for two path-covering problems, LeastSquares and MinPathError, which are at the core of RNA transcript assembly problems from bioinformatics. On various datasets, maximal safe sequences can be computed in under 0.1 seconds per graph, on average, and ILP solvers whose search space is reduced in this manner exhibit significant speed-ups. For example on graphs with a large width, average speed-ups are in the range 50-250× for MinPathError and in the range 80-350× for LeastSquares. Optimizing ILPs using safe sequences can thus become a fast building block of practical RNA transcript assembly tools, and more generally, of path-covering problems.
Cite as

Francisco Sena, Romeo Rizzi, and Alexandru I. Tomescu. Safe Sequences via Dominators in DAGs for Path-Covering Problems. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 55:1-55:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{sena_et_al:LIPIcs.ESA.2025.55,
  author =	{Sena, Francisco and Rizzi, Romeo and Tomescu, Alexandru I.},
  title =	{{Safe Sequences via Dominators in DAGs for Path-Covering Problems}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{55:1--55:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.55},
  URN =		{urn:nbn:de:0030-drops-245230},
  doi =		{10.4230/LIPIcs.ESA.2025.55},
  annote =	{Keywords: directed acyclic graph, path cover, dominator tree, integer linear programming, least squares, minimum path error}
}
Document
DOI: 10.4230/OASIcs.SpaceCHI.2025.18
Advancing Intelligent Personal Assistants for Human Spaceflight

Authors: Leonie Bensch, Oliver Bensch, and Tommy Nilsson

Published in: OASIcs, Volume 130, Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)

Abstract
The Artemis program and upcoming missions to Mars mark a new era of human space exploration that will require new tools to support astronaut autonomy in the absence of real-time communication with Earth. This paper investigates the role of voice-based intelligent personal assistants (IPAs) in future crewed space missions. Through semi-structured interviews with astronauts (n=3) and spaceflight experts (n=12), we identify key user-centered design requirements for IPAs in this uniquely constrained and safety-critical environment. Our thematic analysis reveals core requirements for flexibility, reliability, offline capability, and multimodal interaction. Drawing on these findings, we outline design guidelines for next-generation IPAs and discuss how technologies such as retrieval-augmented generation (RAG), knowledge graphs, and augmented reality should be combined to support flexible, reliable, and multimodal IPAs for future human spaceflight missions.
Cite as

Leonie Bensch, Oliver Bensch, and Tommy Nilsson. Advancing Intelligent Personal Assistants for Human Spaceflight. In Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025). Open Access Series in Informatics (OASIcs), Volume 130, pp. 18:1-18:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bensch_et_al:OASIcs.SpaceCHI.2025.18,
  author =	{Bensch, Leonie and Bensch, Oliver and Nilsson, Tommy},
  title =	{{Advancing Intelligent Personal Assistants for Human Spaceflight}},
  booktitle =	{Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)},
  pages =	{18:1--18:18},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-384-3},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{130},
  editor =	{Bensch, Leonie and Nilsson, Tommy and Nisser, Martin and Pataranutaporn, Pat and Schmidt, Albrecht and Sumini, Valentina},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SpaceCHI.2025.18},
  URN =		{urn:nbn:de:0030-drops-240082},
  doi =		{10.4230/OASIcs.SpaceCHI.2025.18},
  annote =	{Keywords: Conversational Assistant, Intelligent Personal Assistant, Artificial Intelligence, Astronaut, Human Spaceflight, Generative Pre-Trained Transformer (GPT), Retrieval Augmented Generation (RAG), Knowledge Graphs, Augmented Reality, Voice Assistant, Long Duration Spaceflight}
}
Document
RANDOM
DOI: 10.4230/LIPIcs.APPROX/RANDOM.2025.40
Sublinear Space Graph Algorithms in the Continual Release Model

Authors: Alessandro Epasto, Quanquan C. Liu, Tamalika Mukherjee, and Felix Zhou

Published in: LIPIcs, Volume 353, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)

Abstract
The graph continual release model of differential privacy seeks to produce differentially private solutions to graph problems under a stream of edge updates where new private solutions are released after each update. Thus far, previously known edge-differentially private algorithms for most graph problems including densest subgraph and matchings in the continual release setting only output real-value estimates (not vertex subset solutions) and do not use sublinear space. Instead, they rely on computing exact graph statistics on the input [Hendrik Fichtenberger et al., 2021; Shuang Song et al., 2018]. In this paper, we leverage sparsification to address the above shortcomings for edge-insertion streams. Our edge-differentially private algorithms use sublinear space with respect to the number of edges in the graph while some also achieve sublinear space in the number of vertices in the graph. In addition, for the densest subgraph problem, we also output edge-differentially private vertex subset solutions; no previous graph algorithms in the continual release model output such subsets. We make novel use of assorted sparsification techniques from the non-private streaming and static graph algorithms literature to achieve new results in the sublinear space, continual release setting. This includes algorithms for densest subgraph, maximum matching, as well as the first continual release k-core decomposition algorithm. We also develop a novel sparse level data structure for k-core decomposition that may be of independent interest. To complement our insertion-only algorithms, we conclude with polynomial additive error lower bounds for edge-privacy in the fully dynamic setting, where only logarithmic lower bounds were previously known.
Cite as

Alessandro Epasto, Quanquan C. Liu, Tamalika Mukherjee, and Felix Zhou. Sublinear Space Graph Algorithms in the Continual Release Model. In Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 353, pp. 40:1-40:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{epasto_et_al:LIPIcs.APPROX/RANDOM.2025.40,
  author =	{Epasto, Alessandro and Liu, Quanquan C. and Mukherjee, Tamalika and Zhou, Felix},
  title =	{{Sublinear Space Graph Algorithms in the Continual Release Model}},
  booktitle =	{Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)},
  pages =	{40:1--40:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-397-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{353},
  editor =	{Ene, Alina and Chattopadhyay, Eshan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.APPROX/RANDOM.2025.40},
  URN =		{urn:nbn:de:0030-drops-244064},
  doi =		{10.4230/LIPIcs.APPROX/RANDOM.2025.40},
  annote =	{Keywords: Differential Privacy, Continual Release, Densest Subgraph, k-Core Decomposition, Maximum Matching}
}
Document
APPROX
DOI: 10.4230/LIPIcs.APPROX/RANDOM.2025.25
Covering a Few Submodular Constraints and Applications

Authors: Tanvi Bajpai, Chandra Chekuri, and Pooja Kulkarni

Published in: LIPIcs, Volume 353, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)

Abstract
We consider the problem of covering multiple submodular constraints. Given a finite ground set N, a cost function c: N → ℝ_+, r monotone submodular functions f_1,f_2,…,f_r over N and requirements b_1,b_2,…,b_r the goal is to find a minimum cost subset S ⊆ N such that f_i(S) ≥ b_i for 1 ≤ i ≤ r. When r = 1 this is the well-known Submodular Set Cover problem. Previous work [Chekuri et al., 2022] considered the setting when r is large and developed bi-criteria approximation algorithms, and approximation algorithms for the important special case when each f_i is a weighted coverage function. These are fairly general models and capture several concrete and interesting problems as special cases. The approximation ratios for these problem are at least Ω(log r) which is unavoidable when r is part of the input. In this paper, motivated by some recent applications, we consider the problem when r is a fixed constant and obtain two main results. When the f_i are weighted coverage functions from a deletion-closed set system we obtain a (1+ε)(e/(e-1))(1+β)-approximation where β is the approximation ratio for the underlying set cover instances via the natural LP. Second, for covering multiple submodular constraints we obtain a randomized bi-criteria approximation algorithm that for any given integer α ≥ 1 outputs a set S such that f_i(S) ≥ (1-1/e^α-ε)b_i for each i ∈ [r] and 𝔼[c(S)] ≤ (1+ε)α ⋅ OPT. These results show that one can obtain nearly as good an approximation for any fixed r as what one would achieve for r = 1. We also demonstrate applications of our results to implicit covering problems such as fair facility location.
Cite as

Tanvi Bajpai, Chandra Chekuri, and Pooja Kulkarni. Covering a Few Submodular Constraints and Applications. In Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 353, pp. 25:1-25:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bajpai_et_al:LIPIcs.APPROX/RANDOM.2025.25,
  author =	{Bajpai, Tanvi and Chekuri, Chandra and Kulkarni, Pooja},
  title =	{{Covering a Few Submodular Constraints and Applications}},
  booktitle =	{Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)},
  pages =	{25:1--25:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-397-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{353},
  editor =	{Ene, Alina and Chattopadhyay, Eshan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.APPROX/RANDOM.2025.25},
  URN =		{urn:nbn:de:0030-drops-243917},
  doi =		{10.4230/LIPIcs.APPROX/RANDOM.2025.25},
  annote =	{Keywords: covering, linear programming, rounding, fairness}
}
Document
DOI: 10.4230/LIPIcs.WADS.2025.50
Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries

Authors: Tatsuya Terao

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)

Abstract
In the matroid intersection problem, we are given two matroids ℳ₁ = (V, ℐ₁) and ℳ₂ = (V, ℐ₂) defined on the same ground set V of n elements, and the objective is to find a common independent set S ∈ ℐ₁ ∩ ℐ₂ of largest possible cardinality, denoted by r. In this paper, we consider a deterministic matroid intersection algorithm with only a nearly linear number of independence oracle queries. Our contribution is to present a deterministic O(n/(ε) + r log r)-independence-query (2/3-ε)-approximation algorithm for any ε > 0. Our idea is very simple: we apply a recent Õ(n √r/ε)-independence-query (1 - ε)-approximation algorithm of Blikstad [ICALP 2021], but terminate it before completion. Moreover, we also present a semi-streaming algorithm for (2/3 -ε)-approximation of matroid intersection in O(1/ε) passes.
Cite as

Tatsuya Terao. Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 50:1-50:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{terao:LIPIcs.WADS.2025.50,
  author =	{Terao, Tatsuya},
  title =	{{Deterministic (2/3 - \epsilon)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{50:1--50:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.50},
  URN =		{urn:nbn:de:0030-drops-242812},
  doi =		{10.4230/LIPIcs.WADS.2025.50},
  annote =	{Keywords: Matroid intersection, approximation algorithm, streaming algorithm}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.64
Fully Scalable MPC Algorithms for Euclidean k-Center

Authors: Artur Czumaj, Guichen Gao, Mohsen Ghaffari, and Shaofeng H.-C. Jiang

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
The k-center problem is a fundamental optimization problem with numerous applications in machine learning, data analysis, data mining, and communication networks. The k-center problem has been extensively studied in the classical sequential setting for several decades, and more recently there have been some efforts in understanding the problem in parallel computing, on the Massively Parallel Computation (MPC) model. For now, we have a good understanding of k-center in the case where each local MPC machine has sufficient local memory to store some representatives from each cluster, that is, when one has Ω(k) local memory per machine. While this setting covers the case of small values of k, for a large number of clusters these algorithms require undesirably large local memory, making them poorly scalable. The case of large k has been considered only recently for the fully scalable low-local-memory MPC model for the Euclidean instances of the k-center problem. However, the earlier works have been considering only the constant dimensional Euclidean space, required a super-constant number of rounds, and produced only k(1+o(1)) centers whose cost is a super-constant approximation of k-center. In this work, we significantly improve upon the earlier results for the k-center problem for the fully scalable low-local-memory MPC model. In the low dimensional Euclidean case in ℝ^d, we present the first constant-round fully scalable MPC algorithm for (2+ε)-approximation. We push the ratio further to (1 + ε)-approximation albeit using slightly more (1 + ε)k centers. All these results naturally extends to slightly super-constant values of d. In the high-dimensional regime, we provide the first fully scalable MPC algorithm that in a constant number of rounds achieves an O(log n/ log log n)-approximation for k-center.
Cite as

Artur Czumaj, Guichen Gao, Mohsen Ghaffari, and Shaofeng H.-C. Jiang. Fully Scalable MPC Algorithms for Euclidean k-Center. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 64:1-64:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{czumaj_et_al:LIPIcs.ICALP.2025.64,
  author =	{Czumaj, Artur and Gao, Guichen and Ghaffari, Mohsen and Jiang, Shaofeng H.-C.},
  title =	{{Fully Scalable MPC Algorithms for Euclidean k-Center}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{64:1--64:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.64},
  URN =		{urn:nbn:de:0030-drops-234416},
  doi =		{10.4230/LIPIcs.ICALP.2025.64},
  annote =	{Keywords: Massively Parallel Computing, Euclidean Spaces, k-Center Clustering}
}
Document
Brief Announcement
DOI: 10.4230/LIPIcs.SAND.2025.20
Brief Announcement: Efficient Distributed Algorithms for Shape Reduction via Reconfigurable Circuits

Authors: Nada Almalki, Siddharth Gupta, Othon Michail, and Andreas Padalkin

Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)

Abstract
In this paper, we study the problem of efficiently reducing geometric shapes into other such shapes in a distributed setting through size-changing operations. We develop distributed algorithms using the reconfigurable circuit model to enable fast node-to-node communication. Let n denote the number of nodes and k the number of turning points in the initial shape. We show that the system of nodes can reduce itself from any tree to a single node using only shrinking operations in O(k log n) rounds w.h.p. and any tree to its incompressible form in O(log n) rounds given prior knowledge of the incompressible nodes, or O(k log n) without it, w.h.p. We also give an algorithm to transform any tree to a topologically equivalent tree in O(k log n+log² n) rounds w.h.p. using both shrinking and growth operations. On the negative side, we show that one cannot hope for o(log² n)-round transformations for all shapes of Θ(log n) turning points.
Cite as

Nada Almalki, Siddharth Gupta, Othon Michail, and Andreas Padalkin. Brief Announcement: Efficient Distributed Algorithms for Shape Reduction via Reconfigurable Circuits. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 20:1-20:6, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{almalki_et_al:LIPIcs.SAND.2025.20,
  author =	{Almalki, Nada and Gupta, Siddharth and Michail, Othon and Padalkin, Andreas},
  title =	{{Brief Announcement: Efficient Distributed Algorithms for Shape Reduction via Reconfigurable Circuits}},
  booktitle =	{4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
  pages =	{20:1--20:6},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-368-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{330},
  editor =	{Meeks, Kitty and Scheideler, Christian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.20},
  URN =		{urn:nbn:de:0030-drops-230730},
  doi =		{10.4230/LIPIcs.SAND.2025.20},
  annote =	{Keywords: growth process, shrinking process, collision avoidance, programmable matter}
}
Document
DOI: 10.4230/LIPIcs.STACS.2025.9
Improved Approximation Algorithms for (1,2)-TSP and Max-TSP Using Path Covers in the Semi-Streaming Model

Authors: Sharareh Alipour, Ermiya Farokhnejad, and Tobias Mömke

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract
We investigate semi-streaming algorithms for the Traveling Salesman Problem (TSP). Specifically, we focus on a variant known as the (1,2)-TSP, where the distances between any two vertices are either one or two. Our primary emphasis is on the closely related Maximum Path Cover Problem, which aims to find a collection of vertex-disjoint paths that covers the maximum number of edges in a graph. We propose an algorithm that, for any ε > 0, achieves a (2/3-ε)-approximation of the maximum path cover size for an n-vertex graph, using poly(1/ε) passes. This result improves upon the previous 1/2-approximation by Behnezhad et al. [Soheil Behnezhad et al., 2023] in the semi-streaming model. Building on this result, we design a semi-streaming algorithm that constructs a tour for an instance of (1,2)-TSP with an approximation factor of (4/3 + ε), improving upon the previous 3/2-approximation factor algorithm by Behnezhad et al. [Soheil Behnezhad et al., 2023]. Furthermore, we extend our approach to develop an approximation algorithm for the Maximum TSP (Max-TSP), where the goal is to find a Hamiltonian cycle with the maximum possible weight in a given weighted graph G. Our algorithm provides a (7/12 - ε)-approximation for Max-TSP in poly(1/(ε)) passes, improving on the previously known (1/2-ε)-approximation obtained via maximum weight matching in the semi-streaming model.
Cite as

Sharareh Alipour, Ermiya Farokhnejad, and Tobias Mömke. Improved Approximation Algorithms for (1,2)-TSP and Max-TSP Using Path Covers in the Semi-Streaming Model. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 9:1-9:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{alipour_et_al:LIPIcs.STACS.2025.9,
  author =	{Alipour, Sharareh and Farokhnejad, Ermiya and M\"{o}mke, Tobias},
  title =	{{Improved Approximation Algorithms for (1,2)-TSP and Max-TSP Using Path Covers in the Semi-Streaming Model}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{9:1--9:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.9},
  URN =		{urn:nbn:de:0030-drops-228342},
  doi =		{10.4230/LIPIcs.STACS.2025.9},
  annote =	{Keywords: (1,2)-TSP, Max-TSP, Maximum Path Cover, Semi-Streaming Algorithms, Approximation Algorithms, Graph Algorithms}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2025.59
Error Correction for Message Streams

Authors: Meghal Gupta and Rachel Yun Zhang

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)

Abstract
In the setting of error correcting codes, Alice wants to send a message x ∈ {0,1}ⁿ to Bob via an encoding enc(x) that is resilient to error. In this work, we investigate the scenario where Bob is a low space decoder. More precisely, he receives Alice’s encoding enc(x) bit-by-bit and desires to compute some function f(x) in low space. A generic error-correcting code does not accomplish this because decoding is a very global process and requires at least linear space. Locally decodable codes partially solve this problem as they allow Bob to learn a given bit of x in low space, but not compute a generic function f. Our main result is an encoding and decoding procedure where Bob is still able to compute any such function f in low space when a constant fraction of the stream is corrupted. More precisely, we describe an encoding function enc(x) of length poly(n) so that for any decoder (streaming algorithm) A that on input x computes f(x) in space s, there is an explicit decoder B that computes f(x) in space s ⋅ polylog(n) as long as there were not more than 1/4 - ε fraction of (adversarial) errors in the input stream enc(x).
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Meghal Gupta and Rachel Yun Zhang. Error Correction for Message Streams. In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 59:1-59:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{gupta_et_al:LIPIcs.ITCS.2025.59,
  author =	{Gupta, Meghal and Zhang, Rachel Yun},
  title =	{{Error Correction for Message Streams}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{59:1--59:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.59},
  URN =		{urn:nbn:de:0030-drops-226875},
  doi =		{10.4230/LIPIcs.ITCS.2025.59},
  annote =	{Keywords: error-correcting codes, streaming algorithms, space-efficient algorithms}
}
Document
DOI: 10.4230/LIPIcs.FSTTCS.2024.24
When Far Is Better: The Chamberlin-Courant Approach to Obnoxious Committee Selection

Authors: Sushmita Gupta, Tanmay Inamdar, Pallavi Jain, Daniel Lokshtanov, Fahad Panolan, and Saket Saurabh

Published in: LIPIcs, Volume 323, 44th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2024)

Abstract
Classical work on metric space based committee selection problem interprets distance as "near is better". In this work, motivated by real-life situations, we interpret distance as "far is better". Formally stated, we initiate the study of "obnoxious" committee scoring rules when the voters' preferences are expressed via a metric space. To accomplish this, we propose a model where large distances imply high satisfaction (in contrast to the classical setting where shorter distances imply high satisfaction) and study the egalitarian avatar of the well-known Chamberlin-Courant voting rule and some of its generalizations. For a given integer value λ between 1 and k, the committee size, a voter derives satisfaction from only the λth favorite committee member; the goal is to maximize the satisfaction of the least satisfied voter. For the special case of λ = 1, this yields the egalitarian Chamberlin-Courant rule. In this paper, we consider general metric space and the special case of a d-dimensional Euclidean space. We show that when λ is 1 and k, the problem is polynomial-time solvable in ℝ² and general metric space, respectively. However, for λ = k-1, it is NP-hard even in ℝ². Thus, we have "double-dichotomy" in ℝ² with respect to the value of λ, where the extreme cases are solvable in polynomial time but an intermediate case is NP-hard. Furthermore, this phenomenon appears to be "tight" for ℝ² because the problem is NP-hard for general metric space, even for λ = 1. Consequently, we are motivated to explore the problem in the realm of (parameterized) approximation algorithms and obtain positive results. Interestingly, we note that this generalization of Chamberlin-Courant rules encodes practical constraints that are relevant to solutions for certain facility locations.
Cite as

Sushmita Gupta, Tanmay Inamdar, Pallavi Jain, Daniel Lokshtanov, Fahad Panolan, and Saket Saurabh. When Far Is Better: The Chamberlin-Courant Approach to Obnoxious Committee Selection. In 44th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 323, pp. 24:1-24:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{gupta_et_al:LIPIcs.FSTTCS.2024.24,
  author =	{Gupta, Sushmita and Inamdar, Tanmay and Jain, Pallavi and Lokshtanov, Daniel and Panolan, Fahad and Saurabh, Saket},
  title =	{{When Far Is Better: The Chamberlin-Courant Approach to Obnoxious Committee Selection}},
  booktitle =	{44th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2024)},
  pages =	{24:1--24:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-355-3},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{323},
  editor =	{Barman, Siddharth and Lasota, S{\l}awomir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2024.24},
  URN =		{urn:nbn:de:0030-drops-222135},
  doi =		{10.4230/LIPIcs.FSTTCS.2024.24},
  annote =	{Keywords: Metric Space, Parameterized Complexity, Approximation, Obnoxious Facility Location}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2024.24
Exact Algorithms for Clustered Planarity with Linear Saturators

Authors: Giordano Da Lozzo, Robert Ganian, Siddharth Gupta, Bojan Mohar, Sebastian Ordyniak, and Meirav Zehavi

Published in: LIPIcs, Volume 322, 35th International Symposium on Algorithms and Computation (ISAAC 2024)

Abstract
We study Clustered Planarity with Linear Saturators, which is the problem of augmenting an n-vertex planar graph whose vertices are partitioned into independent sets (called clusters) with paths - one for each cluster - that connect all the vertices in each cluster while maintaining planarity. We show that the problem can be solved in time 2^𝒪(n) for both the variable and fixed embedding case. Moreover, we show that it can be solved in subexponential time 2^𝒪(√n log n) in the fixed embedding case if additionally the input graph is connected. The latter time complexity is tight under the Exponential-Time Hypothesis. We also show that n can be replaced with the vertex cover number of the input graph by providing a linear (resp. polynomial) kernel for the variable-embedding (resp. fixed-embedding) case; these results contrast the NP-hardness of the problem on graphs of bounded treewidth (and even on trees). Finally, we complement known lower bounds for the problem by showing that Clustered Planarity with Linear Saturators is NP-hard even when the number of clusters is at most 3, thus excluding the algorithmic use of the number of clusters as a parameter.
Cite as

Giordano Da Lozzo, Robert Ganian, Siddharth Gupta, Bojan Mohar, Sebastian Ordyniak, and Meirav Zehavi. Exact Algorithms for Clustered Planarity with Linear Saturators. In 35th International Symposium on Algorithms and Computation (ISAAC 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 322, pp. 24:1-24:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{dalozzo_et_al:LIPIcs.ISAAC.2024.24,
  author =	{Da Lozzo, Giordano and Ganian, Robert and Gupta, Siddharth and Mohar, Bojan and Ordyniak, Sebastian and Zehavi, Meirav},
  title =	{{Exact Algorithms for Clustered Planarity with Linear Saturators}},
  booktitle =	{35th International Symposium on Algorithms and Computation (ISAAC 2024)},
  pages =	{24:1--24:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-354-6},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{322},
  editor =	{Mestre, Juli\'{a}n and Wirth, Anthony},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2024.24},
  URN =		{urn:nbn:de:0030-drops-221513},
  doi =		{10.4230/LIPIcs.ISAAC.2024.24},
  annote =	{Keywords: Clustered planarity, independent c-graphs, path saturation, graph drawing}
}
Document
DOI: 10.4230/LIPIcs.GD.2024.19
Weakly Leveled Planarity with Bounded Span

Authors: Michael A. Bekos, Giordano Da Lozzo, Fabrizio Frati, Siddharth Gupta, Philipp Kindermann, Giuseppe Liotta, Ignaz Rutter, and Ioannis G. Tollis

Published in: LIPIcs, Volume 320, 32nd International Symposium on Graph Drawing and Network Visualization (GD 2024)

Abstract
This paper studies planar drawings of graphs in which each vertex is represented as a point along a sequence of horizontal lines, called levels, and each edge is either a horizontal segment or a strictly y-monotone curve. A graph is s-span weakly leveled planar if it admits such a drawing where the edges have span at most s; the span of an edge is the number of levels it touches minus one. We investigate the problem of computing s-span weakly leveled planar drawings from both the computational and the combinatorial perspectives. We prove the problem to be para-NP-hard with respect to its natural parameter s and investigate its complexity with respect to widely used structural parameters. We show the existence of a polynomial-size kernel with respect to vertex cover number and prove that the problem is FPT when parameterized by treedepth. We also present upper and lower bounds on the span for various graph classes. Notably, we show that cycle trees, a family of 2-outerplanar graphs generalizing Halin graphs, are Θ(log n)-span weakly leveled planar and 4-span weakly leveled planar when 3-connected. As a byproduct of these combinatorial results, we obtain improved bounds on the edge-length ratio of the graph families under consideration.
Cite as

Michael A. Bekos, Giordano Da Lozzo, Fabrizio Frati, Siddharth Gupta, Philipp Kindermann, Giuseppe Liotta, Ignaz Rutter, and Ioannis G. Tollis. Weakly Leveled Planarity with Bounded Span. In 32nd International Symposium on Graph Drawing and Network Visualization (GD 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 320, pp. 19:1-19:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{bekos_et_al:LIPIcs.GD.2024.19,
  author =	{Bekos, Michael A. and Da Lozzo, Giordano and Frati, Fabrizio and Gupta, Siddharth and Kindermann, Philipp and Liotta, Giuseppe and Rutter, Ignaz and Tollis, Ioannis G.},
  title =	{{Weakly Leveled Planarity with Bounded Span}},
  booktitle =	{32nd International Symposium on Graph Drawing and Network Visualization (GD 2024)},
  pages =	{19:1--19:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-343-0},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{320},
  editor =	{Felsner, Stefan and Klein, Karsten},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GD.2024.19},
  URN =		{urn:nbn:de:0030-drops-213035},
  doi =		{10.4230/LIPIcs.GD.2024.19},
  annote =	{Keywords: Leveled planar graphs, edge span, graph drawing, edge-length ratio}
}
Document
Brief Announcement
DOI: 10.4230/LIPIcs.SAND.2024.23
Brief Announcement: On the Exponential Growth of Geometric Shapes

Authors: Nada Almalki, Siddharth Gupta, and Othon Michail

Published in: LIPIcs, Volume 292, 3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024)

Abstract
We explore how geometric structures (or shapes) can be grown exponentially fast from a single node, through a sequence of centralized growth operations, and if collisions during growth are to be avoided. We identify a parameter k, representing the number of turning points within specific parts of a shape. We prove that, if edges can only be formed when generating new nodes and cannot be deleted, trees having O(k) turning points on every root-to-leaf path can be grown in O(klog n) time steps and spirals with O(log n) turning points can be grown in O(log n) time steps, n being the size of the final shape. For this case, we also show that the maximum number of turning points in a root-to-leaf path of a tree is a lower bound on the number of time steps to grow the tree and that there exists a class of paths such that any path in the class with Ω(k) turning points requires Ω(klog k) time steps to be grown. In the stronger model, where edges can be deleted and neighbors can be handed over to newly generated nodes, we obtain a universal algorithm: for any shape S it gives a process that grows S from a single node exponentially fast.
Cite as

Nada Almalki, Siddharth Gupta, and Othon Michail. Brief Announcement: On the Exponential Growth of Geometric Shapes. In 3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 292, pp. 23:1-23:6, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{almalki_et_al:LIPIcs.SAND.2024.23,
  author =	{Almalki, Nada and Gupta, Siddharth and Michail, Othon},
  title =	{{Brief Announcement: On the Exponential Growth of Geometric Shapes}},
  booktitle =	{3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024)},
  pages =	{23:1--23:6},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-315-7},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{292},
  editor =	{Casteigts, Arnaud and Kuhn, Fabian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2024.23},
  URN =		{urn:nbn:de:0030-drops-199015},
  doi =		{10.4230/LIPIcs.SAND.2024.23},
  annote =	{Keywords: centralized algorithm, growth process, collision, programmable matter}
}
Document
Brief Announcement
DOI: 10.4230/LIPIcs.SAND.2024.26
Brief Announcement: Collision Detection for Modular Robots - It Is Easy to Cause Collisions and Hard to Avoid Them

Authors: Siddharth Gupta, Marc van Kreveld, Othon Michail, and Andreas Padalkin

Published in: LIPIcs, Volume 292, 3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024)

Abstract
We consider geometric collision-detection problems for modular reconfigurable robots. Assuming the nodes (modules) are connected squares on a grid, we investigate the complexity of deciding whether collisions may occur, or can be avoided, if a set of expansion and contraction operations is executed. We study both discrete- and continuous-time models, and allow operations to be coupled into a single parallel group. Our algorithms to decide if a collision may occur run in O(n²log² n) time, O(n²) time, or O(nlog² n) time, depending on the presence and type of coupled operations, in a continuous-time model for a modular robot with n nodes. To decide if collisions can be avoided, we show that a very restricted version is already NP-complete in the discrete-time model, while the same problem is polynomial in the continuous-time model. A less restricted version is NP-hard in the continuous-time model.
Cite as

Siddharth Gupta, Marc van Kreveld, Othon Michail, and Andreas Padalkin. Brief Announcement: Collision Detection for Modular Robots - It Is Easy to Cause Collisions and Hard to Avoid Them. In 3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 292, pp. 26:1-26:5, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{gupta_et_al:LIPIcs.SAND.2024.26,
  author =	{Gupta, Siddharth and van Kreveld, Marc and Michail, Othon and Padalkin, Andreas},
  title =	{{Brief Announcement: Collision Detection for Modular Robots - It Is Easy to Cause Collisions and Hard to Avoid Them}},
  booktitle =	{3rd Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2024)},
  pages =	{26:1--26:5},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-315-7},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{292},
  editor =	{Casteigts, Arnaud and Kuhn, Fabian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2024.26},
  URN =		{urn:nbn:de:0030-drops-199044},
  doi =		{10.4230/LIPIcs.SAND.2024.26},
  annote =	{Keywords: Modular robots, Collision detection, Computational Geometry, Complexity}
}
Document
Position
DOI: 10.4230/TGDK.1.1.5
Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities

Authors: Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
The term life sciences refers to the disciplines that study living organisms and life processes, and include chemistry, biology, medicine, and a range of other related disciplines. Research efforts in life sciences are heavily data-driven, as they produce and consume vast amounts of scientific data, much of which is intrinsically relational and graph-structured. The volume of data and the complexity of scientific concepts and relations referred to therein promote the application of advanced knowledge-driven technologies for managing and interpreting data, with the ultimate aim to advance scientific discovery. In this survey and position paper, we discuss recent developments and advances in the use of graph-based technologies in life sciences and set out a vision for how these technologies will impact these fields into the future. We focus on three broad topics: the construction and management of Knowledge Graphs (KGs), the use of KGs and associated technologies in the discovery of new knowledge, and the use of KGs in artificial intelligence applications to support explanations (explainable AI). We select a few exemplary use cases for each topic, discuss the challenges and open research questions within these topics, and conclude with a perspective and outlook that summarizes the overarching challenges and their potential solutions as a guide for future research.
Cite as

Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma. Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 5:1-5:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{chen_et_al:TGDK.1.1.5,
  author =	{Chen, Jiaoyan and Dong, Hang and Hastings, Janna and Jim\'{e}nez-Ruiz, Ernesto and L\'{o}pez, Vanessa and Monnin, Pierre and Pesquita, Catia and \v{S}koda, Petr and Tamma, Valentina},
  title =	{{Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{5:1--5:33},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.5},
  URN =		{urn:nbn:de:0030-drops-194791},
  doi =		{10.4230/TGDK.1.1.5},
  annote =	{Keywords: Knowledge graphs, Life science, Knowledge discovery, Explainable AI}
}
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