14 Search Results for "Baste, Julien"


Document
A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths

Authors: Julien Baste, Lucas De Meyer, Ugo Giocanti, Etienne Objois, and Timothé Picavet

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)


Abstract
Dumas, Foucaud, Perez and Todinca [SIAM J. Disc. Math., 2024] recently proved that every graph whose edge set can be covered by k shortest paths has pathwidth at most 3^k. In this paper, we improve this upper bound on the pathwidth to a polynomial bound; namely, we show that every graph whose edge set can be covered by k shortest paths has pathwidth O(k⁴), answering a question from the same paper. Moreover, we also prove that when k ≤ 3, every such graph has pathwidth at most k (and this bound is tight). Eventually, we show that even though there exist graphs with arbitrary large treewidth whose vertex set can be covered by 2 isometric trees, every graph whose set of edges can be covered by 2 isometric trees has treewidth at most 2.

Cite as

Julien Baste, Lucas De Meyer, Ugo Giocanti, Etienne Objois, and Timothé Picavet. A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 10:1-10:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{baste_et_al:LIPIcs.STACS.2026.10,
  author =	{Baste, Julien and De Meyer, Lucas and Giocanti, Ugo and Objois, Etienne and Picavet, Timoth\'{e}},
  title =	{{A Polynomial Bound on the Pathwidth of Graphs Edge-Coverable by k Shortest Paths}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{10:1--10:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.10},
  URN =		{urn:nbn:de:0030-drops-254999},
  doi =		{10.4230/LIPIcs.STACS.2026.10},
  annote =	{Keywords: Structural Graph Theory, Coverings, Metrics, Pathwidth, Treewdidth, Parameterized Algorithms, Layerings}
}
Document
Protrusion Decompositions Revisited: Uniform Lossy Kernels for Reducing Treewidth and Linear Kernels for Hitting Disconnected Minors

Authors: Roohani Sharma and Michał Włodarczyk

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)


Abstract
Let ℱ be a finite family of graphs. In the ℱ-Deletion problem, one is given a graph G and an integer k, and the goal is to find k vertices whose deletion results in a graph with no minor from the family ℱ. This may be regarded as a far-reaching generalization of Vertex Cover and Feedback vertex Set. In their seminal work, Fomin, Lokshtanov, Misra & Saurabh [FOCS 2012] gave a polynomial kernel for this problem when the family ℱ contains a planar graph. As the size of their kernel is g(ℱ) ⋅ k^{f(ℱ)}, a natural follow-up question was whether the dependence on ℱ in the exponent of k can be avoided. The answer turned out to be negative: Giannopoulou, Jansen, Lokshtanov & Saurabh [TALG 2017] proved that this is already inevitable for the special case of the Treewidth-η-Deletion problem. In this work, we show that this non-uniformity can be avoided at the expense of a small loss. First, we present a simple 2-approximate kernelization algorithm for Treewidth-η-Deletion with a kernel size g(η) ⋅ k⁶. Next, we show that the approximation factor can be made arbitrarily close to 1, if we settle for a kernelization protocol with 𝒪(1) calls to an oracle that solves instances of size bounded by a uniform polynomial in k. We extend the above results to general ℱ-Deletion, whenever ℱ contains a planar graph, as long as an oracle for Treewidth-η-Deletion is available for small instances. Notably, all our constants are computable functions of ℱ and our techniques work also when some graphs in ℱ may be disconnected. Our results rely on two novel techniques. First, we transform so-called "near-protrusion decompositions" into true protrusion decompositions by sacrificing a small accuracy loss. Secondly, we show how to optimally compress such a decomposition with respect to general ℱ-Deletion. Using our second technique, we also obtain linear kernels on sparse graph classes when ℱ contains a planar graph, whereas the previously known theorems required all graphs in ℱ to be connected. Specifically, we generalize the kernelization algorithm by Kim, Langer, Paul, Reidl, Rossmanith, Sau & Sikdar [TALG 2015] on graph classes that exclude a topological minor.

Cite as

Roohani Sharma and Michał Włodarczyk. Protrusion Decompositions Revisited: Uniform Lossy Kernels for Reducing Treewidth and Linear Kernels for Hitting Disconnected Minors. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 78:1-78:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{sharma_et_al:LIPIcs.STACS.2026.78,
  author =	{Sharma, Roohani and W{\l}odarczyk, Micha{\l}},
  title =	{{Protrusion Decompositions Revisited: Uniform Lossy Kernels for Reducing Treewidth and Linear Kernels for Hitting Disconnected Minors}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{78:1--78:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.78},
  URN =		{urn:nbn:de:0030-drops-255674},
  doi =		{10.4230/LIPIcs.STACS.2026.78},
  annote =	{Keywords: kernelization, graph minors, treewidth, uniform kernels, minor hitting}
}
Document
Finding Diverse Solutions in Combinatorial Problems with a Distributive Lattice Structure

Authors: Mark de Berg, Andrés López Martínez, and Frits Spieksma

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
We generalize the polynomial-time solvability of k-Diverse Minimum s-t Cuts (De Berg et al., ISAAC'23) to a wider class of combinatorial problems whose solution sets have a distributive lattice structure. We identify three structural conditions that, when met by a problem, ensure that a k-sized multiset of maximally-diverse solutions - measured by the sum of pairwise Hamming distances - can be found in polynomial time. We apply this framework to obtain polynomial-time algorithms for finding diverse minimum s-t cuts, diverse stable matchings, and diverse market-clearing price vectors. Moreover, we show that the framework extends to two other natural measures of diversity. Lastly, we present a simpler algorithmic framework for finding a largest set of pairwise disjoint solutions in problems that meet these structural conditions.

Cite as

Mark de Berg, Andrés López Martínez, and Frits Spieksma. Finding Diverse Solutions in Combinatorial Problems with a Distributive Lattice Structure. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 11:1-11:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{deberg_et_al:LIPIcs.ISAAC.2025.11,
  author =	{de Berg, Mark and L\'{o}pez Mart{\'\i}nez, Andr\'{e}s and Spieksma, Frits},
  title =	{{Finding Diverse Solutions in Combinatorial Problems with a Distributive Lattice Structure}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{11:1--11:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.11},
  URN =		{urn:nbn:de:0030-drops-249197},
  doi =		{10.4230/LIPIcs.ISAAC.2025.11},
  annote =	{Keywords: Diversity, Lattice Theory, Submodular Function Minimization}
}
Document
Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion

Authors: Laure Morelle, Ignasi Sau, and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
A replacement action is a function ℒ that maps each graph H to a collection of graphs of size at most |V(H)|. Given a graph class ℋ, we consider a general family of graph modification problems, called ℒ-Replacement to ℋ, where the input is a graph G and the question is whether it is possible to replace some induced subgraph H₁ of G on at most k vertices by a graph H₂ in ℒ(H₁) so that the resulting graph belongs to ℋ. ℒ-Replacement to ℋ can simulate many graph modification problems including vertex deletion, edge deletion/addition/edition/contraction, vertex identification, subgraph complementation, independent set deletion, (induced) matching deletion/contraction, etc. We present two algorithms. The first one solves ℒ-Replacement to ℋ in time 2^poly(k) ⋅ |V(G)|² for every minor-closed graph class ℋ, where poly is a polynomial whose degree depends on ℋ, under a mild technical condition on ℒ. This generalizes the results of Morelle, Sau, Stamoulis, and Thilikos [ICALP 2020, ICALP 2023] for the particular case of Vertex Deletion to ℋ within the same running time. Our second algorithm is an improvement of the first one when ℋ is the class of graphs embeddable in a surface of Euler genus at most g and runs in time 2^𝒪(k⁹) ⋅ |V(G)|², where the 𝒪(⋅) notation depends on g. To the best of our knowledge, these are the first parameterized algorithms with a reasonable parametric dependence for such a general family of graph modification problems to minor-closed classes.

Cite as

Laure Morelle, Ignasi Sau, and Dimitrios M. Thilikos. Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 7:1-7:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{morelle_et_al:LIPIcs.ESA.2025.7,
  author =	{Morelle, Laure and Sau, Ignasi and Thilikos, Dimitrios M.},
  title =	{{Graph Modification of Bounded Size to Minor-Closed Classes as Fast as Vertex Deletion}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{7:1--7:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.7},
  URN =		{urn:nbn:de:0030-drops-244751},
  doi =		{10.4230/LIPIcs.ESA.2025.7},
  annote =	{Keywords: Graph modification problems, Parameterized complexity, Graph minors, Flat Wall theorem, Irrelevant vertex technique, Algorithmic meta-theorem, Parametric dependence, Dynamic programming}
}
Document
Max-Distance Sparsification for Diversification and Clustering

Authors: Soh Kumabe

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
Let 𝒟 be a set family that is the solution domain of some combinatorial problem. The max-min diversification problem on 𝒟 is the problem to select k sets from 𝒟 such that the Hamming distance between any two selected sets is at least d. FPT algorithms parameterized by k+𝓁, where 𝓁 = max_{D ∈ 𝒟}|D|, and k+d have been actively studied recently for several specific domains. This paper provides unified algorithmic frameworks to solve this problem. Specifically, for each parameterization k+𝓁 and k+d, we provide an FPT oracle algorithm for the max-min diversification problem using oracles related to 𝒟. We then demonstrate that our frameworks provide the first FPT algorithms on several new domains 𝒟, including the domain of t-linear matroid intersection, almost 2-SAT, minimum edge s,t-flows, vertex sets of s,t-mincut, vertex sets of edge bipartization, and Steiner trees. We also demonstrate that our frameworks generalize most of the existing domain-specific tractability results. Our main technical breakthrough is introducing the notion of max-distance sparsifier of 𝒟, a domain on which the max-min diversification problem is equivalent to the same problem on the original domain 𝒟. The core of our framework is to design FPT oracle algorithms that construct a constant-size max-distance sparsifier of 𝒟. Using max-distance sparsifiers, we provide FPT algorithms for the max-min and max-sum diversification problems on 𝒟, as well as k-center and k-sum-of-radii clustering problems on 𝒟, which are also natural problems in the context of diversification and have their own interests.

Cite as

Soh Kumabe. Max-Distance Sparsification for Diversification and Clustering. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 46:1-46:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kumabe:LIPIcs.ESA.2025.46,
  author =	{Kumabe, Soh},
  title =	{{Max-Distance Sparsification for Diversification and Clustering}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{46:1--46:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.46},
  URN =		{urn:nbn:de:0030-drops-245146},
  doi =		{10.4230/LIPIcs.ESA.2025.46},
  annote =	{Keywords: Fixed-Parameter Tractability, Diversification, Clustering}
}
Document
Track A: Algorithms, Complexity and Games
Pushing the Frontiers of Subexponential FPT Time for Feedback Vertex Set

Authors: Gaétan Berthe, Marin Bougeret, Daniel Gonçalves, and Jean-Florent Raymond

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
The paper deals with the Feedback Vertex Set problem parameterized by the solution size. Given a graph G and a parameter k, one has to decide if there is a set S of at most k vertices such that G-S is acyclic. Assuming the Exponential Time Hypothesis, it is known that FVS cannot be solved in time 2^{o(k)}n^{𝒪(1)} in general graphs. To overcome this, many recent results considered FVS restricted to particular intersection graph classes and provided such 2^{o(k)}n^{𝒪(1)} algorithms. In this paper we provide generic conditions on a graph class for the existence of an algorithm solving FVS in subexponential FPT time, i.e. time 2^k^ε poly(n), for some ε < 1, where n denotes the number of vertices of the instance and k the parameter. On the one hand this result unifies algorithms that have been proposed over the years for several graph classes such as planar graphs, map graphs, unit-disk graphs, pseudo-disk graphs, and string graphs of bounded edge-degree. On the other hand it extends the tractability horizon of FVS to new classes that are not amenable to previously used techniques, in particular intersection graphs of "thin" objects like segment graphs or more generally s-string graphs.

Cite as

Gaétan Berthe, Marin Bougeret, Daniel Gonçalves, and Jean-Florent Raymond. Pushing the Frontiers of Subexponential FPT Time for Feedback Vertex Set. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 26:1-26:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{berthe_et_al:LIPIcs.ICALP.2025.26,
  author =	{Berthe, Ga\'{e}tan and Bougeret, Marin and Gon\c{c}alves, Daniel and Raymond, Jean-Florent},
  title =	{{Pushing the Frontiers of Subexponential FPT Time for Feedback Vertex Set}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{26:1--26:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.26},
  URN =		{urn:nbn:de:0030-drops-234036},
  doi =		{10.4230/LIPIcs.ICALP.2025.26},
  annote =	{Keywords: Subexponential FPT algorithms, geometric intersection graphs}
}
Document
Track A: Algorithms, Complexity and Games
Algorithms for the Diverse-k-SAT Problem: The Geometry of Satisfying Assignments

Authors: Per Austrin, Ioana O. Bercea, Mayank Goswami, Nutan Limaye, and Adarsh Srinivasan

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)


Abstract
Given a k-CNF formula and an integer s ≥ 2, we study algorithms that obtain s solutions to the formula that are as dispersed as possible. For s = 2, this problem of computing the diameter of a k-CNF formula was initiated by Creszenzi and Rossi, who showed strong hardness results even for k = 2. The current best upper bound [Angelsmark and Thapper '04] goes to 4ⁿ as k → ∞. As our first result, we show that this quadratic blow up is not necessary by utilizing the Fast-Fourier transform (FFT) to give a O^*(2ⁿ) time exact algorithm for computing the diameter of any k-CNF formula. For s > 2, the problem was raised in the SAT community (Nadel '11) and several heuristics have been proposed for it, but no algorithms with theoretical guarantees are known. We give exact algorithms using FFT and clique-finding that run in O^*(2^{(s-1)n}) and O^*(s² |Ω_{𝐅}|^{ω ⌈ s/3 ⌉}) respectively, where |Ω_{𝐅}| is the size of the solutions space of the formula 𝐅 and ω is the matrix multiplication exponent. However, current SAT algorithms for finding one solution run in time O^*(2^{ε_{k}n}) for ε_{k} ≈ 1-Θ(1/k), which is much faster than all above run times. As our main result, we analyze two popular SAT algorithms - PPZ (Paturi, Pudlák, Zane '97) and Schöning’s ('02) algorithms, and show that in time poly(s)O^*(2^{ε_{k}n}), they can be used to approximate diameter as well as the dispersion (s > 2) problem. While we need to modify Schöning’s original algorithm for technical reasons, we show that the PPZ algorithm, without any modification, samples solutions in a geometric sense. We believe this geometric sampling property of PPZ may be of independent interest. Finally, we focus on diverse solutions to NP-complete optimization problems, and give bi-approximations running in time poly(s)O^*(2^{ε n}) with ε < 1 for several problems such as Maximum Independent Set, Minimum Vertex Cover, Minimum Hitting Set, Feedback Vertex Set, Multicut on Trees and Interval Vertex Deletion. For all of these problems, all existing exact methods for finding optimal diverse solutions have a runtime with at least an exponential dependence on the number of solutions s. Our methods show that by relaxing to bi-approximations, this dependence on s can be made polynomial.

Cite as

Per Austrin, Ioana O. Bercea, Mayank Goswami, Nutan Limaye, and Adarsh Srinivasan. Algorithms for the Diverse-k-SAT Problem: The Geometry of Satisfying Assignments. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 14:1-14:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{austrin_et_al:LIPIcs.ICALP.2025.14,
  author =	{Austrin, Per and Bercea, Ioana O. and Goswami, Mayank and Limaye, Nutan and Srinivasan, Adarsh},
  title =	{{Algorithms for the Diverse-k-SAT Problem: The Geometry of Satisfying Assignments}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{14:1--14:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.14},
  URN =		{urn:nbn:de:0030-drops-233916},
  doi =		{10.4230/LIPIcs.ICALP.2025.14},
  annote =	{Keywords: Exponential time algorithms, Satisfiability, k-SAT, PPZ, Sch\"{o}ning, Dispersion, Diversity}
}
Document
Matching and Edge Cover in Temporal Graphs

Authors: Lapo Cioni, Riccardo Dondi, Andrea Marino, Jason Schoeters, and Ana Silva

Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)


Abstract
Temporal graphs are a special class of graphs for which a temporal component is added to edges, that is, each edge possesses a set of times at which it is available and can be traversed. Many classical problems on graphs can be translated to temporal graphs, and the results may differ. In this paper, we define the {Temporal Edge Cover} and {Temporal Matching} problems and show that they are NP-complete even when fixing the lifetime or when the underlying graph is a tree. We then describe two FPT algorithms, with parameters lifetime and treewidth, that solve the two problems. We also find lower bounds for the approximation of the two problems and give two approximation algorithms which match these bounds. Finally, we discuss the differences between the problems in the temporal and the static framework.

Cite as

Lapo Cioni, Riccardo Dondi, Andrea Marino, Jason Schoeters, and Ana Silva. Matching and Edge Cover in Temporal Graphs. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 8:1-8:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cioni_et_al:LIPIcs.SAND.2025.8,
  author =	{Cioni, Lapo and Dondi, Riccardo and Marino, Andrea and Schoeters, Jason and Silva, Ana},
  title =	{{Matching and Edge Cover in Temporal Graphs}},
  booktitle =	{4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
  pages =	{8:1--8:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-368-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{330},
  editor =	{Meeks, Kitty and Scheideler, Christian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.8},
  URN =		{urn:nbn:de:0030-drops-230614},
  doi =		{10.4230/LIPIcs.SAND.2025.8},
  annote =	{Keywords: graphs, temporal graphs, edge cover, matching, parameterized algorithm, approximation algorithm}
}
Document
Enumeration of Minimal Hitting Sets Parameterized by Treewidth

Authors: Batya Kenig and Dan Shlomo Mizrahi

Published in: LIPIcs, Volume 328, 28th International Conference on Database Theory (ICDT 2025)


Abstract
Enumerating the minimal hitting sets of a hypergraph is a problem which arises in many data management applications that include constraint mining, discovering unique column combinations, and enumerating database repairs. Previously, Eiter et al. [Thomas Eiter et al., 2003] showed that the minimal hitting sets of an n-vertex hypergraph, with treewidth w, can be enumerated with delay O^*(n^w) (ignoring polynomial factors), with space requirements that scale with the output size. We improve this to fixed-parameter-linear delay, following an FPT preprocessing phase. The memory consumption of our algorithm is exponential with respect to the treewidth of the hypergraph.

Cite as

Batya Kenig and Dan Shlomo Mizrahi. Enumeration of Minimal Hitting Sets Parameterized by Treewidth. In 28th International Conference on Database Theory (ICDT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 328, pp. 8:1-8:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kenig_et_al:LIPIcs.ICDT.2025.8,
  author =	{Kenig, Batya and Mizrahi, Dan Shlomo},
  title =	{{Enumeration of Minimal Hitting Sets Parameterized by Treewidth}},
  booktitle =	{28th International Conference on Database Theory (ICDT 2025)},
  pages =	{8:1--8:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-364-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{328},
  editor =	{Roy, Sudeepa and Kara, Ahmet},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICDT.2025.8},
  URN =		{urn:nbn:de:0030-drops-229498},
  doi =		{10.4230/LIPIcs.ICDT.2025.8},
  annote =	{Keywords: Enumeration, Hitting sets}
}
Document
Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics

Authors: Bertrand Marchand, Yann Ponty, and Laurent Bulteau

Published in: LIPIcs, Volume 201, 21st International Workshop on Algorithms in Bioinformatics (WABI 2021)


Abstract
Hard graph problems are ubiquitous in Bioinformatics, inspiring the design of specialized Fixed-Parameter Tractable algorithms, many of which rely on a combination of tree-decomposition and dynamic programming. The time/space complexities of such approaches hinge critically on low values for the treewidth tw of the input graph. In order to extend their scope of applicability, we introduce the Tree-Diet problem, i.e. the removal of a minimal set of edges such that a given tree-decomposition can be slimmed down to a prescribed treewidth tw'. Our rationale is that the time gained thanks to a smaller treewidth in a parameterized algorithm compensates the extra post-processing needed to take deleted edges into account. Our core result is an FPT dynamic programming algorithm for Tree-Diet, using 2^{O(tw)}n time and space. We complement this result with parameterized complexity lower-bounds for stronger variants (e.g., NP-hardness when tw' or tw-tw' is constant). We propose a prototype implementation for our approach which we apply on difficult instances of selected RNA-based problems: RNA design, sequence-structure alignment, and search of pseudoknotted RNAs in genomes, revealing very encouraging results. This work paves the way for a wider adoption of tree-decomposition-based algorithms in Bioinformatics.

Cite as

Bertrand Marchand, Yann Ponty, and Laurent Bulteau. Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics. In 21st International Workshop on Algorithms in Bioinformatics (WABI 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 201, pp. 7:1-7:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)


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@InProceedings{marchand_et_al:LIPIcs.WABI.2021.7,
  author =	{Marchand, Bertrand and Ponty, Yann and Bulteau, Laurent},
  title =	{{Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics}},
  booktitle =	{21st International Workshop on Algorithms in Bioinformatics (WABI 2021)},
  pages =	{7:1--7:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-200-6},
  ISSN =	{1868-8969},
  year =	{2021},
  volume =	{201},
  editor =	{Carbone, Alessandra and El-Kebir, Mohammed},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2021.7},
  URN =		{urn:nbn:de:0030-drops-143604},
  doi =		{10.4230/LIPIcs.WABI.2021.7},
  annote =	{Keywords: RNA, treewidth, FPT algorithms, RNA design, structure-sequence alignment}
}
Document
A Complexity Dichotomy for Hitting Small Planar Minors Parameterized by Treewidth

Authors: Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 115, 13th International Symposium on Parameterized and Exact Computation (IPEC 2018)


Abstract
For a fixed graph H, we are interested in the parameterized complexity of the following problem, called {H}-M-Deletion, parameterized by the treewidth tw of the input graph: given an n-vertex graph G and an integer k, decide whether there exists S subseteq V(G) with |S| <= k such that G setminus S does not contain H as a minor. In previous work [IPEC, 2017] we proved that if H is planar and connected, then the problem cannot be solved in time 2^{o(tw)} * n^{O(1)} under the ETH, and can be solved in time 2^{O(tw * log tw)} * n^{O(1)}. In this article we manage to classify the optimal asymptotic complexity of {H}-M-Deletion when H is a connected planar graph on at most 5 vertices. Out of the 29 possibilities (discarding the trivial case H = K_1), we prove that 9 of them are solvable in time 2^{Theta (tw)} * n^{O(1)}, and that the other 20 ones are solvable in time 2^{Theta (tw * log tw)} * n^{O(1)}. Namely, we prove that K_4 and the diamond are the only graphs on at most 4 vertices for which the problem is solvable in time 2^{Theta (tw * log tw)} * n^{O(1)}, and that the chair and the banner are the only graphs on 5 vertices for which the problem is solvable in time 2^{Theta (tw)} * n^{O(1)}. For the version of the problem where H is forbidden as a topological minor, the case H = K_{1,4} can be solved in time 2^{Theta (tw)} * n^{O(1)}. This exhibits, to the best of our knowledge, the first difference between the computational complexity of both problems.

Cite as

Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos. A Complexity Dichotomy for Hitting Small Planar Minors Parameterized by Treewidth. In 13th International Symposium on Parameterized and Exact Computation (IPEC 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 115, pp. 2:1-2:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)


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@InProceedings{baste_et_al:LIPIcs.IPEC.2018.2,
  author =	{Baste, Julien and Sau, Ignasi and Thilikos, Dimitrios M.},
  title =	{{A Complexity Dichotomy for Hitting Small Planar Minors Parameterized by Treewidth}},
  booktitle =	{13th International Symposium on Parameterized and Exact Computation (IPEC 2018)},
  pages =	{2:1--2:13},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-084-2},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{115},
  editor =	{Paul, Christophe and Pilipczuk, Michal},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2018.2},
  URN =		{urn:nbn:de:0030-drops-102033},
  doi =		{10.4230/LIPIcs.IPEC.2018.2},
  annote =	{Keywords: parameterized complexity, graph minors, treewidth, hitting minors, topological minors, dynamic programming, Exponential Time Hypothesis}
}
Document
Parameterized Complexity of Finding a Spanning Tree with Minimum Reload Cost Diameter

Authors: Julien Baste, Didem Gözüpek, Christophe Paul, Ignasi Sau, Mordechai Shalom, and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)


Abstract
We study the minimum diameter spanning tree problem under the reload cost model (DIAMETER-TREE for short) introduced by Wirth and Steffan (2001). In this problem, given an undirected edge-colored graph G, reload costs on a path arise at a node where the path uses consecutive edges of different colors. The objective is to find a spanning tree of G of minimum diameter with respect to the reload costs. We initiate a systematic study of the parameterized complexity of the DIAMETER-TREE problem by considering the following parameters: the cost of a solution, and the treewidth and the maximum degree Delta of the input graph. We prove that DIAMETER-TREE is para-np-hard for any combination of two of these three parameters, and that it is FPT parameterized by the three of them. We also prove that the problem can be solved in polynomial time on cactus graphs. This result is somehow surprising since we prove DIAMETER-TREE to be NP-hard on graphs of treewidth two, which is best possible as the problem can be trivially solved on forests. When the reload costs satisfy the triangle inequality, Wirth and Steffan (2001) proved that the problem can be solved in polynomial time on graphs with Delta=3, and Galbiati (2008) proved that it is NP-hard if Delta=4. Our results show, in particular, that without the requirement of the triangle inequality, the problem is NP-hard if Delta=3, which is also best possible. Finally, in the case where the reload costs are polynomially bounded by the size of the input graph, we prove that DIAMETER-TREE is in XP and W[1]-hard parameterized by the treewidth plus Delta.

Cite as

Julien Baste, Didem Gözüpek, Christophe Paul, Ignasi Sau, Mordechai Shalom, and Dimitrios M. Thilikos. Parameterized Complexity of Finding a Spanning Tree with Minimum Reload Cost Diameter. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 3:1-3:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)


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@InProceedings{baste_et_al:LIPIcs.IPEC.2017.3,
  author =	{Baste, Julien and G\"{o}z\"{u}pek, Didem and Paul, Christophe and Sau, Ignasi and Shalom, Mordechai and Thilikos, Dimitrios M.},
  title =	{{Parameterized Complexity of Finding a Spanning Tree with Minimum Reload Cost Diameter}},
  booktitle =	{12th International Symposium on Parameterized and Exact Computation (IPEC 2017)},
  pages =	{3:1--3:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-051-4},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{89},
  editor =	{Lokshtanov, Daniel and Nishimura, Naomi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.3},
  URN =		{urn:nbn:de:0030-drops-85545},
  doi =		{10.4230/LIPIcs.IPEC.2017.3},
  annote =	{Keywords: reload cost problems, minimum diameter spanning tree, parameterized complexity, FPT algorithm, treewidth, dynamic programming}
}
Document
Optimal Algorithms for Hitting (Topological) Minors on Graphs of Bounded Treewidth

Authors: Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)


Abstract
For a fixed collection of graphs F, the F-M-DELETION problem consists in, given a graph G and an integer k, decide whether there exists a subset S of V(G) of size at most k such that G-S does not contain any of the graphs in F as a minor. We are interested in the parameterized complexity of F-M-DELETION when the parameter is the treewidth of G, denoted by tw. Our objective is to determine, for a fixed F}, the smallest function f_F such that F-M-DELETION can be solved in time f_F(tw)n^{O(1)} on n-vertex graphs. Using and enhancing the machinery of boundaried graphs and small sets of representatives introduced by Bodlaender et al. [J ACM, 2016], we prove that when all the graphs in F are connected and at least one of them is planar, then f_F(w) = 2^{O(wlog w)}. When F is a singleton containing a clique, a cycle, or a path on i vertices, we prove the following asymptotically tight bounds: - f_{K_4}(w) = 2^{Theta(wlog w)}. - f_{C_i}(w) = 2^{Theta(w)} for every i<5, and f_{C_i}(w) = 2^{Theta(wlog w)} for every i>4. - f_{P_i}(w) = 2^{Theta(w)} for every i<5, and f_{P_i}(w) = 2^{Theta(wlog w)} for every i>5. The lower bounds hold unless the Exponential Time Hypothesis fails, and the superexponential ones are inspired by a reduction of Marcin Pilipczuk [Discrete Appl Math, 2016]. The single-exponential algorithms use, in particular, the rank-based approach introduced by Bodlaender et al. [Inform Comput, 2015]. We also consider the version of the problem where the graphs in F are forbidden as topological minors, and prove essentially the same set of results holds.

Cite as

Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos. Optimal Algorithms for Hitting (Topological) Minors on Graphs of Bounded Treewidth. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 4:1-4:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)


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@InProceedings{baste_et_al:LIPIcs.IPEC.2017.4,
  author =	{Baste, Julien and Sau, Ignasi and Thilikos, Dimitrios M.},
  title =	{{Optimal Algorithms for Hitting (Topological) Minors on Graphs of Bounded Treewidth}},
  booktitle =	{12th International Symposium on Parameterized and Exact Computation (IPEC 2017)},
  pages =	{4:1--4:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-051-4},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{89},
  editor =	{Lokshtanov, Daniel and Nishimura, Naomi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.4},
  URN =		{urn:nbn:de:0030-drops-85556},
  doi =		{10.4230/LIPIcs.IPEC.2017.4},
  annote =	{Keywords: parameterized complexity, graph minors, treewidth, hitting minors, topological minors, dynamic programming, Exponential Time Hypothesis}
}
Document
Contraction-Bidimensionality of Geometric Intersection Graphs

Authors: Julien Baste and Dimitrios M. Thilikos

Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)


Abstract
Given a graph G, we define bcg(G) as the minimum k for which G can be contracted to the uniformly triangulated grid Gamma_k. A graph class G has the SQGC property if every graph G in G has treewidth O(bcg(G)c) for some 1 <= c < 2. The SQGC property is important for algorithm design as it defines the applicability horizon of a series of meta-algorithmic results, in the framework of bidimensionality theory, related to fast parameterized algorithms, kernelization, and approximation schemes. These results apply to a wide family of problems, namely problems that are contraction-bidimensional. Our main combinatorial result reveals a general family of graph classes that satisfy the SQGC property and includes bounded-degree string graphs. This considerably extends the applicability of bidimensionality theory for several intersection graph classes of 2-dimensional geometrical objects.

Cite as

Julien Baste and Dimitrios M. Thilikos. Contraction-Bidimensionality of Geometric Intersection Graphs. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 5:1-5:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)


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@InProceedings{baste_et_al:LIPIcs.IPEC.2017.5,
  author =	{Baste, Julien and Thilikos, Dimitrios M.},
  title =	{{Contraction-Bidimensionality of Geometric Intersection Graphs}},
  booktitle =	{12th International Symposium on Parameterized and Exact Computation (IPEC 2017)},
  pages =	{5:1--5:13},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-051-4},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{89},
  editor =	{Lokshtanov, Daniel and Nishimura, Naomi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.5},
  URN =		{urn:nbn:de:0030-drops-85487},
  doi =		{10.4230/LIPIcs.IPEC.2017.5},
  annote =	{Keywords: Grid exlusion theorem, Bidimensionality, Geometric intersection graphs, String Graphs}
}
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