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DOI: 10.4230/LIPIcs.STACS.2026.11

The Diameter of (Threshold) Geometric Inhomogeneous Random Graphs

Authors: Zylan Benjert, Kostas Lakis, Johannes Lengler, and Raghu Raman Ravi

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)

Abstract

We prove that the diameter of threshold (zero temperature) Geometric Inhomogeneous Random Graphs (GIRG) is asymptotically almost surely Θ(log n). This has strong implications for the runtime of many distributed protocols on those graphs, which often have runtimes bounded as a function of the diameter. The GIRG model exhibits many properties empirically found in real-world networks, and the runtime of various practical algorithms has empirically been found to scale in the same way for GIRG and for real-world networks, in particular related to computing distances, diameter, clustering, cliques and chromatic numbers. Thus the GIRG model is a promising candidate for deriving insight about the performance of algorithms in real-world instances. The diameter was previously only known in the one-dimensional case, and the proof relied very heavily on dimension one. Our proof employs a similar Peierls-type argument alongside a novel renormalization scheme. Moreover, instead of using topological arguments (which become complicated in high dimensions) in establishing the connectivity of certain boundaries, we employ some comparatively recent and clearer graph-theoretic machinery. The lower bound is proven via a simple ad-hoc construction.

Cite as

Zylan Benjert, Kostas Lakis, Johannes Lengler, and Raghu Raman Ravi. The Diameter of (Threshold) Geometric Inhomogeneous Random Graphs. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 11:1-11:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{benjert_et_al:LIPIcs.STACS.2026.11,
  author =	{Benjert, Zylan and Lakis, Kostas and Lengler, Johannes and Ravi, Raghu Raman},
  title =	{{The Diameter of (Threshold) Geometric Inhomogeneous Random Graphs}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{11:1--11:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.11},
  URN =		{urn:nbn:de:0030-drops-255009},
  doi =		{10.4230/LIPIcs.STACS.2026.11},
  annote =	{Keywords: GIRG, Diameter, Distributed Algorithms, Complex Networks}
}

Document

DOI: 10.4230/LIPIcs.IPEC.2025.4

On the Complexity of Secluded Path Problems

Authors: Tesshu Hanaka and Daisuke Tsuru

Published in: LIPIcs, Volume 358, 20th International Symposium on Parameterized and Exact Computation (IPEC 2025)

Abstract

This paper investigates the complexity of finding secluded paths in graphs. We focus on the Short Secluded Path problem and a natural new variant we introduce, Shortest Secluded Path. Formally, given an undirected graph G = (V, E), two vertices s,t ∈ V, and two integers k,l, the Short Secluded Path problem asks whether there exists an s-t path of length at most k with at most l neighbors. This problem is known to be computationally hard: it is W[1]-hard when parameterized by the path length k or by cliquewidth, and para-NP-complete when parameterized by the number l of neighbors. The fixed-parameter tractability is known for k+l or treewidth. In this paper, we expand the parameterized complexity landscape by designing (1) an XP algorithm parameterized by cliquewidth and (2) fixed-parameter algorithms parameterized by neighborhood diversity and twin cover number, respectively. As a byproduct, our results also provide parameterized algorithms for the classic s-t k-Path problem. Furthermore, we introduce the Shortest Secluded Path problem, which seeks a shortest s-t path with the minimum number of neighbors. In contrast to the hardness of the original problem, we reveal that this variant is solvable in polynomial time on unweighted graphs. We complete this by showing that for edge-weighted graphs, the problem becomes W[1]-hard yet remains in XP when parameterized by the shortest path distance between s and t.

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Tesshu Hanaka and Daisuke Tsuru. On the Complexity of Secluded Path Problems. In 20th International Symposium on Parameterized and Exact Computation (IPEC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 358, pp. 4:1-4:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{hanaka_et_al:LIPIcs.IPEC.2025.4,
  author =	{Hanaka, Tesshu and Tsuru, Daisuke},
  title =	{{On the Complexity of Secluded Path Problems}},
  booktitle =	{20th International Symposium on Parameterized and Exact Computation (IPEC 2025)},
  pages =	{4:1--4:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-407-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{358},
  editor =	{Agrawal, Akanksha and van Leeuwen, Erik Jan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2025.4},
  URN =		{urn:nbn:de:0030-drops-251361},
  doi =		{10.4230/LIPIcs.IPEC.2025.4},
  annote =	{Keywords: Secluded path, Parameterized complexity, Polynomial-time algorithm}
}

Document

DOI: 10.4230/LIPIcs.IPEC.2025.18

Bridging Treewidth and Clique-Width via Cograph-Modular-Treewidth

Authors: Václav Blažej, Satyabrata Jana, M. S. Ramanujan, and Peter Strulo

Published in: LIPIcs, Volume 358, 20th International Symposium on Parameterized and Exact Computation (IPEC 2025)

Abstract

Many classical graph problems - such as Max Cut, Chromatic Number, Edge Dominating Set, and Hamiltonian Cycle - are polynomial-time solvable on cographs, fixed-parameter tractable (FPT) when parameterized by treewidth, but W[1]-hard when parameterized by clique-width. In contrast, Graph Isomorphism is FPT parameterized by treewidth, but for clique-width it is known to be in XP; whether it is FPT or W[1]-hard is open. This reveals a sharp tractability gap between treewidth and clique-width. In this work, we propose a new structural graph parameter, 𝒞-modular-treewidth, which lies between treewidth and clique-width. The parameter leverages modular decomposition and restricts modules to induce graphs from a fixed class 𝒞 (e.g., cographs or edgeless graphs). By exploiting true and false twins - a hallmark of cograph-like structure - our parameter allows the design of efficient algorithms for several hard problems beyond the reach of treewidth-based methods. In this work, we show that 𝒞-modular-treewidth enables efficient solutions under suitable choices of 𝒞, opening a new pathway in the parameterized complexity landscape between treewidth and clique-width. In particular we show that - When parameterized by cograph-modular-treewidth, Isomorphism admits an FPT algorithm, whereas Chromatic Number remains W[1]-hard. - When parameterized by independent-modular-treewidth, Hamiltonian Cycle and Edge Dominating Set remain W[1]-hard.

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Václav Blažej, Satyabrata Jana, M. S. Ramanujan, and Peter Strulo. Bridging Treewidth and Clique-Width via Cograph-Modular-Treewidth. In 20th International Symposium on Parameterized and Exact Computation (IPEC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 358, pp. 18:1-18:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{blazej_et_al:LIPIcs.IPEC.2025.18,
  author =	{Bla\v{z}ej, V\'{a}clav and Jana, Satyabrata and Ramanujan, M. S. and Strulo, Peter},
  title =	{{Bridging Treewidth and Clique-Width via Cograph-Modular-Treewidth}},
  booktitle =	{20th International Symposium on Parameterized and Exact Computation (IPEC 2025)},
  pages =	{18:1--18:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-407-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{358},
  editor =	{Agrawal, Akanksha and van Leeuwen, Erik Jan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2025.18},
  URN =		{urn:nbn:de:0030-drops-251507},
  doi =		{10.4230/LIPIcs.IPEC.2025.18},
  annote =	{Keywords: Treewidth, Clique-width, Cograph, FPT, W\lbrack1\rbrack-hard}
}

Document

DOI: 10.4230/LIPIcs.ISAAC.2025.33

Coloring Reconfiguration Under Color Swapping

Authors: Janosch Fuchs, Rin Saito, Tatsuhiro Suga, Takahiro Suzuki, and Yuma Tamura

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract

In the Coloring Reconfiguration problem, we are given two proper k-colorings of a graph and asked to decide whether one can be transformed into the other by repeatedly applying a specified recoloring rule, while maintaining a proper coloring throughout. For this problem, two recoloring rules have been widely studied: single-vertex recoloring and Kempe chain recoloring. In this paper, we introduce a new rule, called color swapping, where two adjacent vertices may exchange their colors, so that the resulting coloring remains proper, and study the computational complexity of the problem under this rule. We first establish a complexity dichotomy with respect to k: the problem is solvable in polynomial time for k ≤ 2, and is PSPACE-complete for k ≥ 3. We further show that the problem remains PSPACE-complete even on restricted graph classes, including bipartite graphs, split graphs, and planar graphs of bounded degree. In contrast, we present polynomial-time algorithms for several graph classes: for paths when k = 3, for split graphs when k is fixed, and for cographs when k is arbitrary.

Cite as

Janosch Fuchs, Rin Saito, Tatsuhiro Suga, Takahiro Suzuki, and Yuma Tamura. Coloring Reconfiguration Under Color Swapping. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 33:1-33:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{fuchs_et_al:LIPIcs.ISAAC.2025.33,
  author =	{Fuchs, Janosch and Saito, Rin and Suga, Tatsuhiro and Suzuki, Takahiro and Tamura, Yuma},
  title =	{{Coloring Reconfiguration Under Color Swapping}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{33:1--33:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.33},
  URN =		{urn:nbn:de:0030-drops-249411},
  doi =		{10.4230/LIPIcs.ISAAC.2025.33},
  annote =	{Keywords: Combinatorial reconfiguration, graph coloring, PSPACE-complete, graph algorithm}
}

Document

DOI: 10.4230/LIPIcs.ESA.2025.39

Going Beyond Surfaces in Diameter Approximation

Authors: Michał Włodarczyk

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract

Calculating the diameter of an undirected graph requires quadratic running time under the Strong Exponential Time Hypothesis and this barrier works even against any approximation better than 3/2. For planar graphs with positive edge weights, there are known (1+ε)-approximation algorithms with running time poly(1/ε, log n)⋅ n. However, these algorithms rely on shortest path separators and this technique falls short to yield efficient algorithms beyond graphs of bounded genus. In this work we depart from embedding-based arguments and obtain diameter approximations relying on VC set systems and the local treewidth property. We present two orthogonal extensions of the planar case by giving (1+ε)-approximation algorithms with the following running times: - 𝒪_h((1/ε)^𝒪(h) ⋅ nlog² n)-time algorithm for graphs excluding an apex graph of size h as a minor, - 𝒪_d((1/ε)^𝒪(d) ⋅ nlog² n)-time algorithm for the class of d-apex graphs. As a stepping stone, we obtain efficient (1+ε)-approximate distance oracles for graphs excluding an apex graph of size h as a minor. Our oracle has preprocessing time 𝒪_h((1/ε)⁸⋅ nlog nlog W) and query time 𝒪_h((1/ε)²⋅log n log W), where W is the metric stretch. Such oracles have been so far only known for bounded genus graphs. All our algorithms are deterministic.

Cite as

Michał Włodarczyk. Going Beyond Surfaces in Diameter Approximation. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 39:1-39:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{wlodarczyk:LIPIcs.ESA.2025.39,
  author =	{W{\l}odarczyk, Micha{\l}},
  title =	{{Going Beyond Surfaces in Diameter Approximation}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{39:1--39:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.39},
  URN =		{urn:nbn:de:0030-drops-245076},
  doi =		{10.4230/LIPIcs.ESA.2025.39},
  annote =	{Keywords: diameter, approximation, distance oracles, graph minors, treewidth}
}

Document

DOI: 10.4230/LIPIcs.WADS.2025.12

Testing Whether a Subgraph Is Convex or Isometric

Authors: Sergio Cabello

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)

Abstract

We consider the following two algorithmic problems: given a graph G and a subgraph H ⊆ G, decide whether H is an isometric or a geodesically convex subgraph of G. It is relatively easy to see that the problems can be solved by computing the distances between all pairs of vertices. We provide a conditional lower bound showing that, for sparse graphs with n vertices and Θ(n) edges, we cannot expect to solve the problem in O(n^{2-ε}) time for any constant ε > 0. We also show that the problem can be solved in subquadratic time for planar graphs and in near-linear time for graphs of bounded treewidth. Finally, we provide a near-linear time algorithm for the setting where G is a plane graph and H is defined by a few cycles in G.

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Sergio Cabello. Testing Whether a Subgraph Is Convex or Isometric. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 12:1-12:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{cabello:LIPIcs.WADS.2025.12,
  author =	{Cabello, Sergio},
  title =	{{Testing Whether a Subgraph Is Convex or Isometric}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{12:1--12:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.12},
  URN =		{urn:nbn:de:0030-drops-242439},
  doi =		{10.4230/LIPIcs.WADS.2025.12},
  annote =	{Keywords: convex subgraph, isometric subgraph, plane graph}
}

Document

DOI: 10.4230/LIPIcs.MFCS.2025.51

Word Structures and Their Automatic Presentations

Authors: Xiaoyang Gong, Bakh Khoussainov, and Yuyang Zhuge

Published in: LIPIcs, Volume 345, 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)

Abstract

We study automatic presentations of the structures (ℕ; S), (ℕ; E_S), (ℕ; ≤), and their expansions by a unary predicate U. Here S is the successor function, E_S is the undirected version of S, and ≤ is the natural order. We call these structures word structures. Our goal is three-fold. First, we study the isomorphism problem for automatic word structures by focusing on the following three problems. The first problem asks to design an algorithm that, given an automatic structure A, decides if A is isomorphic to (ℕ; S). The second asks to design an algorithm that, given two automatic presentations of (ℕ; S, U₁) and (ℕ; S, U₂), where U₁ and U₂ are unary predicates, decides if these structures are isomorphic. The third problem investigates if there is an algorithm that, given two automatic presentations of (ℕ; ≤, U₁) and (ℕ; ≤, U₂), decides whether U₁ ∩ U₂ ≠ ∅. We show that these problems are undecidable. Next, we study intrinsic regularity of the function S in the structure Path_ω = (ℕ; E_S). We build an automatic presentation of Path_ω in which S is not regular. This implies that S is not intrinsically regular in Path_ω. For U ⊆ ℕ, let d_U be the function that computes the distances between the consecutive elements of U. We build automatic presentations of (ℕ; ≤, U) where d_U can realise logarithmic, radical, intermediate, and exponential functions.

Cite as

Xiaoyang Gong, Bakh Khoussainov, and Yuyang Zhuge. Word Structures and Their Automatic Presentations. In 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 345, pp. 51:1-51:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{gong_et_al:LIPIcs.MFCS.2025.51,
  author =	{Gong, Xiaoyang and Khoussainov, Bakh and Zhuge, Yuyang},
  title =	{{Word Structures and Their Automatic Presentations}},
  booktitle =	{50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)},
  pages =	{51:1--51:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-388-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{345},
  editor =	{Gawrychowski, Pawe{\l} and Mazowiecki, Filip and Skrzypczak, Micha{\l}},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2025.51},
  URN =		{urn:nbn:de:0030-drops-241581},
  doi =		{10.4230/LIPIcs.MFCS.2025.51},
  annote =	{Keywords: Automatic structures, the isomorphism problem, decidability, undecidability, regular relations}
}

Document

DOI: 10.4230/LIPIcs.WABI.2025.9

Dolphyin: A Combinatorial Algorithm for Identifying 1-Dollo Phylogenies in Cancer

Authors: Daniel W. Feng and Mohammed El-Kebir

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract

Several recent cancer phylogeny inference methods have used the k-Dollo evolutionary model for single-nucleotide variants. Specifically, in this problem one is given an m × n binary matrix B and seeks a rooted tree T with m leaves that correspond to the m rows of B, and each node of T is labeled by a binary state for each of the n characters subject to the restriction that each character is gained at most once (0-to-1 transition) and subsequently lost at most k times (1-to-0 transitions). The 1-Dollo variant, also known as the persistent perfect phylogeny where one is restricted to at most k = 1 losses per character, has been studied extensively, but its hardness remains an open question. Here, we prove that the 1-Dollo Linear Phylogeny (1DLP) problem, where we additionally require the resulting 1-Dollo phylogeny T to be linear, is equivalent to verifying whether the input matrix B adheres to the Consecutive Ones Property (C1P), which can be solved in polynomial time. Due to the equivalence, several known NP-hardness results for relevant variants of C1P carry over to 1DLP, including the minimization of false negatives (0-to-1 modifications to the input matrix B) or the allowance of 2 gains and 2 losses. We furthermore show how we can recursively decompose any, not necessarily linear, 1-Dollo phylogeny T into several 1-Dollo linear phylogenies, connected by matching branching points. We extend this characterization to matrices B that admit 1-Dollo phylogenies, giving necessary and sufficient conditions for the existence of a novel decomposition of B into several submatrices and corresponding branching points. This decomposition forms the basis of Dolphyin, a new exponential-time algorithm for inferring 1-Dollo phylogenies that efficiently leverages the determination of linear 1-Dollo phylogenies as a subroutine. Dolphyin can also be applied to input matrices B with false negatives. We demonstrate that Dolphyin is runtime-competitive with a previous integer linear programming based algorithm SPhyR on simulated datasets. We additionally analyze simulated datasets with false negative errors and find that in the median case, Dolphyin infers 1-Dollo phylogenies with inferred error rates at or below the ground truth rate. Finally, we apply Dolphyin to 99 acute myeloid leukemia single-cell sequencing datasets, finding that the majority of the cancers can be explained by 1-Dollo phylogenies with false negative error rates in line with the used sequencing technology. Availability. Dolphyin is available at: https://github.com/elkebir-group/Dolphyin.

Cite as

Daniel W. Feng and Mohammed El-Kebir. Dolphyin: A Combinatorial Algorithm for Identifying 1-Dollo Phylogenies in Cancer. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 9:1-9:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{feng_et_al:LIPIcs.WABI.2025.9,
  author =	{Feng, Daniel W. and El-Kebir, Mohammed},
  title =	{{Dolphyin: A Combinatorial Algorithm for Identifying 1-Dollo Phylogenies in Cancer}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{9:1--9:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.9},
  URN =		{urn:nbn:de:0030-drops-239356},
  doi =		{10.4230/LIPIcs.WABI.2025.9},
  annote =	{Keywords: Intra-tumor heterogeneity, persistent perfect phylogeny, consecutive ones property, combinatorics}
}

Document

DOI: 10.4230/LIPIcs.CP.2025.32

BFS-Based Canonical Codes for Generating Graphs with Constraint Programming

Authors: Xiao Peng and Christine Solnon

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)

Abstract

We consider the problem of generating all graphs that satisfy some given additional constraints (on vertex degrees, or cycle lengths, for example). Most previous works have proposed to generate canonical codes associated with adjacency matrices. In this paper, we consider canonical codes based on Breadth First Search (BFS), and we show how to generate them with Constraint Programming (CP): we introduce a set of basic constraints that must be satisfied by all canonical codes, thus breaking many symmetries, and we introduce a global constraint to break other symmetries. We illustrate the interest of our approach on connected claw-free cubic graphs, and show that it outperforms state-of-the-art CP and SAT Modulo Theory (SMT) approaches.

Cite as

Xiao Peng and Christine Solnon. BFS-Based Canonical Codes for Generating Graphs with Constraint Programming. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 32:1-32:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{peng_et_al:LIPIcs.CP.2025.32,
  author =	{Peng, Xiao and Solnon, Christine},
  title =	{{BFS-Based Canonical Codes for Generating Graphs with Constraint Programming}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{32:1--32:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.32},
  URN =		{urn:nbn:de:0030-drops-238935},
  doi =		{10.4230/LIPIcs.CP.2025.32},
  annote =	{Keywords: Graph Generation, Automorphisms, Symmetry Breaking}
}

Document

DOI: 10.4230/LIPIcs.CP.2025.19

Analyzing Self-Stabilization of Synchronous Unison via Propositional Satisfiability

Authors: Asma Khoualdia, Sami Cherif, Stéphane Devismes, and Léo Robert

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)

Abstract

Synchronous unison is a classical clock synchronization problem in distributed computing, and especially in self-stabilization. This paper explores the self-stabilization of a synchronous unison algorithm proposed by Arora et al. using a propositional satisfiability-based approach. We give a logical formulation of the algorithm. This formulation includes the uniqueness of clock values at each node, the updates of clocks based on the minimum clock value in the neighborhood, and the detection of convergence or divergence. To optimize the models, additional constraints are introduced to reduce redundant cases of initial configurations to be analyzed. Our approach not only verifies the algorithm’s behaviour but also offers insights into enhancing its robustness and applicability to broader distributed systems.

Cite as

Asma Khoualdia, Sami Cherif, Stéphane Devismes, and Léo Robert. Analyzing Self-Stabilization of Synchronous Unison via Propositional Satisfiability. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 19:1-19:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{khoualdia_et_al:LIPIcs.CP.2025.19,
  author =	{Khoualdia, Asma and Cherif, Sami and Devismes, St\'{e}phane and Robert, L\'{e}o},
  title =	{{Analyzing Self-Stabilization of Synchronous Unison via Propositional Satisfiability}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{19:1--19:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.19},
  URN =		{urn:nbn:de:0030-drops-238806},
  doi =		{10.4230/LIPIcs.CP.2025.19},
  annote =	{Keywords: Self-stabilization, Synchronous Unison, Satisfiability}
}

Document

DOI: 10.4230/LIPIcs.SEA.2025.17

Computing the Exact Radius of Large Graphs

Authors: Stefan Funke, Claudius Proissl, and Sabine Storandt

Published in: LIPIcs, Volume 338, 23rd International Symposium on Experimental Algorithms (SEA 2025)

Abstract

The radius of a graph is an important structural parameter which plays a key role in social network analysis and related applications. It measures the minimum shortest path distance that is required to reach all nodes in the graph from a single node. A node from which all other nodes are within a distance equal to the radius is called a center of the graph. In a graph with n nodes and m edges, the center and the radius can be determined in Õ(nm) by computing shortest path distances between all pairs of nodes. Fine-grained complexity results suggest that asymptotically faster algorithms are unlikely to exist. In this paper, we describe a novel randomized algorithm for exact radius computation in weighted digraphs with an expected running time in Õ(d³m) where d is the so-called combinatorial dimension. Our methodology is inspired by Clarkson’s algorithm for LP-type problems. The value of d denotes the size of a basis, which is a smallest subset of nodes which enforce the same radius as the whole node set. While we show that there exist graphs with d ∈ Θ(n), our empirical analysis reveals that even large real-world graphs have small combinatorial dimension. This allows us to compute the radius in near-linear time on such instances. The significantly improved scalability can be clearly observed in our experimental evaluation on a diverse set of benchmark graphs.

Cite as

Stefan Funke, Claudius Proissl, and Sabine Storandt. Computing the Exact Radius of Large Graphs. In 23rd International Symposium on Experimental Algorithms (SEA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 338, pp. 17:1-17:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{funke_et_al:LIPIcs.SEA.2025.17,
  author =	{Funke, Stefan and Proissl, Claudius and Storandt, Sabine},
  title =	{{Computing the Exact Radius of Large Graphs}},
  booktitle =	{23rd International Symposium on Experimental Algorithms (SEA 2025)},
  pages =	{17:1--17:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-375-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{338},
  editor =	{Mutzel, Petra and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2025.17},
  URN =		{urn:nbn:de:0030-drops-232555},
  doi =		{10.4230/LIPIcs.SEA.2025.17},
  annote =	{Keywords: Radius, Graph Center, LP-type, Combinatorial Dimension}
}

Document

Track A: Algorithms, Complexity and Games

DOI: 10.4230/LIPIcs.ICALP.2025.109

Faster Diameter Computation in Graphs of Bounded Euler Genus

Authors: Kacper Kluk, Marcin Pilipczuk, Michał Pilipczuk, and Giannos Stamoulis

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract

We show that for any fixed integer k ⩾ 0, there exists an algorithm that computes the diameter and the eccentricies of all vertices of an input unweighted, undirected n-vertex graph of Euler genus at most k in time 𝒪_k(n^{2-1/25}). Furthermore, for the more general class of graphs that can be constructed by clique-sums from graphs that are of Euler genus at most k after deletion of at most k vertices, we show an algorithm for the same task that achieves the running time bound 𝒪_k(n^{2-1/356} log^{6k} n). Up to today, the only known subquadratic algorithms for computing the diameter in those graph classes are that of [Ducoffe, Habib, Viennot; SICOMP 2022], [Le, Wulff-Nilsen; SODA 2024], and [Duraj, Konieczny, Potępa; ESA 2024]. These algorithms work in the more general setting of K_h-minor-free graphs, but the running time bound is 𝒪_h(n^{2-c_h}) for some constant c_h > 0 depending on h. That is, our savings in the exponent of the polynomial function of n, as compared to the naive quadratic algorithm, are independent of the parameter k. The main technical ingredient of our work is an improved bound on the number of distance profiles, as defined in [Le, Wulff-Nilsen; SODA 2024], in graphs of bounded Euler genus.

Cite as

Kacper Kluk, Marcin Pilipczuk, Michał Pilipczuk, and Giannos Stamoulis. Faster Diameter Computation in Graphs of Bounded Euler Genus. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 109:1-109:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{kluk_et_al:LIPIcs.ICALP.2025.109,
  author =	{Kluk, Kacper and Pilipczuk, Marcin and Pilipczuk, Micha{\l} and Stamoulis, Giannos},
  title =	{{Faster Diameter Computation in Graphs of Bounded Euler Genus}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{109:1--109:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.109},
  URN =		{urn:nbn:de:0030-drops-234869},
  doi =		{10.4230/LIPIcs.ICALP.2025.109},
  annote =	{Keywords: Diameter, eccentricity, subquadratic algorithms, surface-embeddable graphs}
}

Document

DOI: 10.4230/LIPIcs.SoCG.2025.63

The Maximum Clique Problem in a Disk Graph Made Easy

Authors: J. Mark Keil and Debajyoti Mondal

Published in: LIPIcs, Volume 332, 41st International Symposium on Computational Geometry (SoCG 2025)

Abstract

A disk graph is an intersection graph of disks in ℝ². Determining the computational complexity of finding a maximum clique in a disk graph is a long-standing open problem. In 1990, Clark, Colbourn, and Johnson gave a polynomial-time algorithm for computing a maximum clique in a unit disk graph. However, finding a maximum clique when disks are of arbitrary size is widely believed to be a challenging open problem. In this paper, we provide a new perspective to examine adjacencies in a disk graph that helps obtain the following results. - We design an 𝒪^*(n^{2k})-time algorithm, where 𝒪^* hides a polynomial factor, to find a maximum clique in a n-vertex disk graph with k different sizes of radii. This is polynomial for every fixed k, and thus settles the open question for the case when k = 2. - Given a set of n unit disks, we show how to compute a maximum clique inside each possible axis-aligned rectangle determined by the disk centers in O(n⁵log n)-time. This is at least a factor of n^{4/3} faster than applying the fastest known algorithm for finding a maximum clique in a unit disk graph for each rectangle independently. - We give an 𝒪^*(n^{2rk})-time algorithm to find a maximum clique in a n-vertex ball graph with k different sizes of radii where the ball centers lie on r parallel planes. This is polynomial for every fixed k and r, and thus contrasts the previously known NP-hardness result for finding a maximum clique in an arbitrary ball graph. - We design an 𝒪^*(n^{2k})-time algorithm to find a maximum clique in the intersection graph of a set S of n L-visible convex polygons, where k is the number of distinct shapes in S. This contrasts the known hardness result on finding a maximum clique in the intersection graph of unit disks and axis-aligned rectangles.

Cite as

J. Mark Keil and Debajyoti Mondal. The Maximum Clique Problem in a Disk Graph Made Easy. In 41st International Symposium on Computational Geometry (SoCG 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 332, pp. 63:1-63:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{keil_et_al:LIPIcs.SoCG.2025.63,
  author =	{Keil, J. Mark and Mondal, Debajyoti},
  title =	{{The Maximum Clique Problem in a Disk Graph Made Easy}},
  booktitle =	{41st International Symposium on Computational Geometry (SoCG 2025)},
  pages =	{63:1--63:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-370-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{332},
  editor =	{Aichholzer, Oswin and Wang, Haitao},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2025.63},
  URN =		{urn:nbn:de:0030-drops-232155},
  doi =		{10.4230/LIPIcs.SoCG.2025.63},
  annote =	{Keywords: Geometric Intersection Graphs, Disk Graphs, Ball Graphs, Maximum Clique}
}

Document

DOI: 10.4230/LIPIcs.SAND.2025.6

Dismountability in Temporal Cliques Revisited

Authors: Daniele Carnevale, Arnaud Casteigts, and Timothée Corsini

Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)

Abstract

A temporal graph is a graph whose edges are available only at certain points in time. It is temporally connected if the nodes can reach each other by paths that traverse the edges chronologically (temporal paths). Unlike static graphs, temporal graphs do not always admit small subsets of edges that preserve connectivity (temporal spanners) - there exist temporal graphs with Θ(n²) edges, all of which are critical. In the case of temporal cliques (the underlying graph is complete), spanners of size O(nlog n) are guaranteed. The original proof of this result by Casteigts et al. [ICALP 2019] combines a number of techniques, one of which is called dismountability. In a recent work, Angrick et al. [ESA 2024] simplified the proof and showed, among other things, that a one-sided version of dismountability can replace elegantly the second part of the proof. In this paper, we revisit methodically the dismountability principle. We start by characterizing the structure that a temporal clique must have if it is non 1-hop dismountable, then neither 1-hop nor 2-hop (i.e. non {1,2}-hop) dismountable, and finally non {1,2,3}-hop dismountable. It turns out that if a clique is k-hop dismountable for any other k, then it must also be {1,2,3}-hop dismountable, thus no additional structure can be obtained beyond this point. Interestingly, excluding 1-hop and 2-hop dismountability is already sufficient for reducing the spanner problem from cliques to extremally matched bicliques, where the O(nlog n) result is subsequently obtained. Put together with the strategy of Angrick et al., this entire result can now be recovered using only dismountability. An interesting by-product of our analysis is that any minimal counter-example to the existence of 4n spanners must satisfy the properties of non {1,2,3}-hop dismountable cliques. In the second part, we discuss further connections between dismountability and another technique called pivotability. In particular, we show that if a temporal clique is recursively k-hop dismountable, then it is also pivotable (and thus admits a 2n spanner, whatever k). We also study a family of labelings called full-range that forces both dismountability and pivotability. The latter gives some evidence that large lifetimes could be exploited more generally for the construction of spanners.

Cite as

Daniele Carnevale, Arnaud Casteigts, and Timothée Corsini. Dismountability in Temporal Cliques Revisited. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 6:1-6:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{carnevale_et_al:LIPIcs.SAND.2025.6,
  author =	{Carnevale, Daniele and Casteigts, Arnaud and Corsini, Timoth\'{e}e},
  title =	{{Dismountability in Temporal Cliques Revisited}},
  booktitle =	{4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
  pages =	{6:1--6:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-368-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{330},
  editor =	{Meeks, Kitty and Scheideler, Christian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.6},
  URN =		{urn:nbn:de:0030-drops-230591},
  doi =		{10.4230/LIPIcs.SAND.2025.6},
  annote =	{Keywords: Dynamic networks, Temporal graphs, Reachability, Dismountability, Pivotability, Temporal spanners, Full-range graphs}
}

Document

DOI: 10.4230/LIPIcs.STACS.2025.6

Twin-Width One

Authors: Jungho Ahn, Hugo Jacob, Noleen Köhler, Christophe Paul, Amadeus Reinald, and Sebastian Wiederrecht

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract

We investigate the structure of graphs of twin-width at most 1, and obtain the following results: - Graphs of twin-width at most 1 are permutation graphs. In particular they have an intersection model and a linear structure. - There is always a 1-contraction sequence closely following a given permutation diagram. - Based on a recursive decomposition theorem, we obtain a simple algorithm running in linear time that produces a 1-contraction sequence of a graph, or guarantees that it has twin-width more than 1. - We characterise distance-hereditary graphs based on their twin-width and deduce a linear time algorithm to compute optimal sequences on this class of graphs.

Cite as

Jungho Ahn, Hugo Jacob, Noleen Köhler, Christophe Paul, Amadeus Reinald, and Sebastian Wiederrecht. Twin-Width One. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 6:1-6:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ahn_et_al:LIPIcs.STACS.2025.6,
  author =	{Ahn, Jungho and Jacob, Hugo and K\"{o}hler, Noleen and Paul, Christophe and Reinald, Amadeus and Wiederrecht, Sebastian},
  title =	{{Twin-Width One}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{6:1--6:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.6},
  URN =		{urn:nbn:de:0030-drops-228319},
  doi =		{10.4230/LIPIcs.STACS.2025.6},
  annote =	{Keywords: Twin-width, Hereditary graph classes, Intersection model}
}

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