21 Search Results for "Fu, Hu"

Document
DOI: 10.4230/LIPIcs.ESA.2025.52
Beating Competitive Ratio 4 for Graphic Matroid Secretary

Authors: Kiarash Banihashem, MohammadTaghi Hajiaghayi, Dariusz R. Kowalski, Piotr Krysta, Danny Mittal, and Jan Olkowski

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
One of the classic problems in online decision-making is the secretary problem, where the goal is to hire the best secretary out of n rankable applicants or, in a natural extension, to maximize the probability of selecting the largest number from a sequence arriving in random order. Many works have considered generalizations of this problem where one can accept multiple values subject to a combinatorial constraint. The seminal work of Babaioff, Immorlica, Kempe, and Kleinberg (SODA'07, JACM'18) proposed the matroid secretary conjecture, suggesting that there exists an O(1)-competitive algorithm for the matroid constraint, and many works since have attempted to obtain algorithms for both general matroids and specific classes of matroids. The ultimate goal of these results is to obtain an e-competitive algorithm, and the strong matroid secretary conjecture states that this is possible for general matroids. One of the most important classes of matroids is the graphic matroid, where a set of edges in a graph is deemed independent if it contains no cycle. Given the rich combinatorial structure of graphs, obtaining algorithms for these matroids is often seen as a good first step towards solving the problem for general matroids. For matroid secretary, Babaioff et al. (SODA'07, JACM'18) first studied graphic matroid case and obtained a 16-competitive algorithm. Subsequent works have improved the competitive ratio, most recently to 4 by Soto, Turkieltaub, and Verdugo (SODA'18). In this paper, we break the 4-competitive barrier for the problem, obtaining a new algorithm with a competitive ratio of 3.95. For the special case of simple graphs (i.e., graphs that do not contain parallel edges) we further improve this to 3.77. Intuitively, solving the problem for simple graphs is easier as they do not contain cycles of length two. A natural question that arises is whether we can obtain a ratio arbitrarily close to e by assuming the graph has a large enough girth. We answer this question affirmatively, proving that one can obtain a competitive ratio arbitrarily close to e even for constant values of girth, providing further evidence for the strong matroid secretary conjecture. We further show that this bound is tight: for any constant g, one cannot obtain a competitive ratio better than e even if we assume that the input graph has girth at least g. To our knowledge, such a bound was not previously known even for simple graphs.
Cite as

Kiarash Banihashem, MohammadTaghi Hajiaghayi, Dariusz R. Kowalski, Piotr Krysta, Danny Mittal, and Jan Olkowski. Beating Competitive Ratio 4 for Graphic Matroid Secretary. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 52:1-52:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{banihashem_et_al:LIPIcs.ESA.2025.52,
  author =	{Banihashem, Kiarash and Hajiaghayi, MohammadTaghi and Kowalski, Dariusz R. and Krysta, Piotr and Mittal, Danny and Olkowski, Jan},
  title =	{{Beating Competitive Ratio 4 for Graphic Matroid Secretary}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{52:1--52:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.52},
  URN =		{urn:nbn:de:0030-drops-245205},
  doi =		{10.4230/LIPIcs.ESA.2025.52},
  annote =	{Keywords: online algorithms, graphic matroids, secretary problem}
}
Document
DOI: 10.4230/LIPIcs.DNA.31.11
Leakless Polymerase-Dependent Strand Displacement Systems

Authors: Zoë Evelyn Mōhalakealoha Derauf and Chris Thachuk

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)

Abstract
A grand challenge facing molecular programmers is the rational development of fast, robust, and isothermal architectures akin to "chemical central processing units" that can sense (bio-)chemical signals from their environment, perform complex computation, and orchestrate a physical response in situ. DNA strand displacement systems (DSDs) remain a compelling candidate, but are hampered by spurious reaction pathways that lead to incorrect output. DSDs that utilize the systematic leakless motif can be made arbitrarily robust at the cost of increasing redundancy and network size (scaling), and thus a degradation of kinetic performance. Another class of architectures utilize DNA hybridization, extension, and signal production of entirely sequestered outputs via strand-displacing polymerases (SDPs) that have resulted in impressive demonstrations; however, they face similar challenges of aberrant behavior such as mis-priming by incorrect signals. Our work introduces a unified polymerase-dependent toehold-mediated strand displacement (PD-TMSD) architecture that integrates the programmed specificity of DSDs with the unique advantages of SDPs. This unification enables systems that can be made arbitrarily robust, at any concentration range, without increasing network size. We propose a number of gate designs and composition rules to compute arbitrary Boolean functions, emulate arbitrary chemical reaction networks, and explore time-bounded probabilistic computation made possible by certain classes of SDPs. Our theoretical exploration is backed by preliminary experimental demonstrations. This contribution was inspired by the belief that molecular programming can meet or exceed the complexity exhibited in biology if we embrace its best understood molecular machinery and couple it with systematic design principles built upon a strong theoretical foundation.
Cite as

Zoë Evelyn Mōhalakealoha Derauf and Chris Thachuk. Leakless Polymerase-Dependent Strand Displacement Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 11:1-11:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{derauf_et_al:LIPIcs.DNA.31.11,
  author =	{Derauf, Zo\"{e} Evelyn M\={o}halakealoha and Thachuk, Chris},
  title =	{{Leakless Polymerase-Dependent Strand Displacement Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{11:1--11:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.11},
  URN =		{urn:nbn:de:0030-drops-238608},
  doi =		{10.4230/LIPIcs.DNA.31.11},
  annote =	{Keywords: DNA strand displacement, strand-displacing polymerases, molecular computation, energy barriers, kinetics}
}
Document
DOI: 10.4230/LIPIcs.CONCUR.2025.31
Compositional Reasoning for Parametric Probabilistic Automata

Authors: Hannah Mertens, Tim Quatmann, and Joost-Pieter Katoen

Published in: LIPIcs, Volume 348, 36th International Conference on Concurrency Theory (CONCUR 2025)

Abstract
We establish an assume-guarantee (AG) framework for compositional reasoning about multi-objective queries in parametric probabilistic automata (pPA) - an extension to probabilistic automata (PA), where transition probabilities are functions over a finite set of parameters. We lift an existing framework for PA to the pPA setting, incorporating asymmetric, circular, and interleaving proof rules. Our approach enables the verification of a broad spectrum of multi-objective queries for pPA, encompassing probabilistic properties and (parametric) expected total rewards. Additionally, we introduce a rule for reasoning about monotonicity in composed pPAs.
Cite as

Hannah Mertens, Tim Quatmann, and Joost-Pieter Katoen. Compositional Reasoning for Parametric Probabilistic Automata. In 36th International Conference on Concurrency Theory (CONCUR 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 348, pp. 31:1-31:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{mertens_et_al:LIPIcs.CONCUR.2025.31,
  author =	{Mertens, Hannah and Quatmann, Tim and Katoen, Joost-Pieter},
  title =	{{Compositional Reasoning for Parametric Probabilistic Automata}},
  booktitle =	{36th International Conference on Concurrency Theory (CONCUR 2025)},
  pages =	{31:1--31:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-389-8},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{348},
  editor =	{Bouyer, Patricia and van de Pol, Jaco},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CONCUR.2025.31},
  URN =		{urn:nbn:de:0030-drops-239810},
  doi =		{10.4230/LIPIcs.CONCUR.2025.31},
  annote =	{Keywords: Verification, Probabilistic systems, Assume-guarantee reasoning, Parametric Probabilistic Automata, Parameter synthesis}
}
Document
DOI: 10.4230/LIPIcs.GIScience.2025.1
Leveraging Open-Source Satellite-Derived Building Footprints for Height Inference

Authors: Clinton Stipek, Taylor Hauser, Justin Epting, Jessica Moehl, and Daniel Adams

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)

Abstract
At a global scale, cities are growing and characterizing the built environment is essential for deeper understanding of human population patterns, urban development, energy usage, climate change impacts, among others. Buildings are a key component of the built environment and significant progress has been made in recent years to scale building footprint extractions from satellite datum and other remotely sensed products. Billions of building footprints have recently been released by companies such as Microsoft and Google at a global scale. However, research has shown that depending on the methods leveraged to produce a footprint dataset, discrepancies can arise in both the number and shape of footprints produced. Therefore, each footprint dataset should be examined and used on a case-by-case study. In this work, we find through two experiments on Oak Ridge National Laboratory and Microsoft footprints within the same geographic extent that our approach of inferring height from footprint morphology features is source agnostic. Regardless of the differences associated with the methods used to produce a building footprint dataset, our approach of inferring height was able to overcome these discrepancies between the products and generalize, as evidenced by 98% of our results being within 3m of the ground-truthed height. This signifies that our approach can be applied to the billions of open-source footprints which are freely available to infer height, a key building metric. This work impacts the broader domain of urban science in which building height is a key, and limiting factor.
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Clinton Stipek, Taylor Hauser, Justin Epting, Jessica Moehl, and Daniel Adams. Leveraging Open-Source Satellite-Derived Building Footprints for Height Inference. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 1:1-1:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{stipek_et_al:LIPIcs.GIScience.2025.1,
  author =	{Stipek, Clinton and Hauser, Taylor and Epting, Justin and Moehl, Jessica and Adams, Daniel},
  title =	{{Leveraging Open-Source Satellite-Derived Building Footprints for Height Inference}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{1:1--1:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.1},
  URN =		{urn:nbn:de:0030-drops-238306},
  doi =		{10.4230/LIPIcs.GIScience.2025.1},
  annote =	{Keywords: Building Height, Big Data, Machine Learning}
}
Document
DOI: 10.4230/LIPIcs.GIScience.2025.12
Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing

Authors: Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)

Abstract
Millions of biological sample records collected in the last few centuries archived in natural history collections are un-georeferenced. Georeferencing complex locality descriptions associated with these collection samples is a highly labour-intensive task collection agencies struggle with. None of the existing automated methods exploit maps that are an essential tool for georeferencing complex relations. We present preliminary experiments and results of a novel method that exploits multi-modal capabilities of recent Large Multi-Modal Models (LMM). This method enables the model to visually contextualize spatial relations it reads in the locality description. We use a grid-based approach to adapt these auto-regressive models for this task in a zero-shot setting. Our experiments conducted on a small manually annotated dataset show impressive results for our approach (∼1 km Average distance error) compared to uni-modal georeferencing with Large Language Models and existing georeferencing tools. The paper also discusses the findings of the experiments in light of an LMM’s ability to comprehend fine-grained maps. Motivated by these results, a practical framework is proposed to integrate this method into a georeferencing workflow.
Cite as

Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones. Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 12:1-12:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{wijegunarathna_et_al:LIPIcs.GIScience.2025.12,
  author =	{Wijegunarathna, Kalana and Stock, Kristin and Jones, Christopher B.},
  title =	{{Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{12:1--12:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.12},
  URN =		{urn:nbn:de:0030-drops-238412},
  doi =		{10.4230/LIPIcs.GIScience.2025.12},
  annote =	{Keywords: Large Multi-Modal Models, Large Language Models, LLM, Georeferencing, Natural History collections}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.137
Universal Online Contention Resolution with Preselected Order

Authors: Junyao Zhao

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
Online contention resolution scheme (OCRS) is a powerful technique for online decision making, which - in the case of matroids - given a matroid and a prior distribution of active elements, selects a subset of active elements that satisfies the matroid constraint in an online fashion. OCRS has been studied mostly for product distributions in the literature. Recently, universal OCRS, that works even for correlated distributions, has gained interest, because it naturally generalizes the classic notion, and its existence in the random-order arrival model turns out to be equivalent to the matroid secretary conjecture. However, currently very little is known about how to design universal OCRSs for any arrival model. In this work, we consider a natural and relatively flexible arrival model, where the OCRS is allowed to preselect (i.e., non-adaptively select) the arrival order of the elements, and within this model, we design simple and optimal universal OCRSs that are computationally efficient. In the course of deriving our OCRSs, we also discover an efficient reduction from universal online contention resolution to the matroid secretary problem for any arrival model, answering a question posed in [Dughmi, 2020].
Cite as

Junyao Zhao. Universal Online Contention Resolution with Preselected Order. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 137:1-137:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{zhao:LIPIcs.ICALP.2025.137,
  author =	{Zhao, Junyao},
  title =	{{Universal Online Contention Resolution with Preselected Order}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{137:1--137:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.137},
  URN =		{urn:nbn:de:0030-drops-235147},
  doi =		{10.4230/LIPIcs.ICALP.2025.137},
  annote =	{Keywords: Matroids, online contention resolution schemes, secretary problems}
}
Document
DOI: 10.4230/LIPIcs.ECOOP.2025.36
Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees

Authors: Guanqin Zhang, Kota Fukuda, Zhenya Zhang, H.M.N. Dilum Bandara, Shiping Chen, Jianjun Zhao, and Yulei Sui

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)

Abstract
The vulnerability of neural networks to adversarial perturbations has necessitated formal verification techniques that can rigorously certify the quality of neural networks. As the state-of-the-art, branch-and-bound (BaB) is a "divide-and-conquer" strategy that applies off-the-shelf verifiers to sub-problems for which they perform better. While BaB can identify the sub-problems that are necessary to be split, it explores the space of these sub-problems in a naive "first-come-first-served" manner, thereby suffering from an issue of inefficiency to reach a verification conclusion. To bridge this gap, we introduce an order over different sub-problems produced by BaB, concerning with their different likelihoods of containing counterexamples. Based on this order, we propose a novel verification framework Oliva that explores the sub-problem space by prioritizing those sub-problems that are more likely to find counterexamples, in order to efficiently reach the conclusion of the verification. Even if no counterexample can be found in any sub-problem, it only changes the order of visiting different sub-problems and so will not lead to a performance degradation. Specifically, Oliva has two variants, including Oliva^GR, a greedy strategy that always prioritizes the sub-problems that are more likely to find counterexamples, and Oliva^SA, a balanced strategy inspired by simulated annealing that gradually shifts from exploration to exploitation to locate the globally optimal sub-problems. We experimentally evaluate the performance of Oliva on 690 verification problems spanning over 5 models with datasets MNIST and CIFAR-10. Compared to the state-of-the-art approaches, we demonstrate the speedup of Oliva for up to 25× in MNIST, and up to 80× in CIFAR-10.
Cite as

Guanqin Zhang, Kota Fukuda, Zhenya Zhang, H.M.N. Dilum Bandara, Shiping Chen, Jianjun Zhao, and Yulei Sui. Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 36:1-36:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{zhang_et_al:LIPIcs.ECOOP.2025.36,
  author =	{Zhang, Guanqin and Fukuda, Kota and Zhang, Zhenya and Bandara, H.M.N. Dilum and Chen, Shiping and Zhao, Jianjun and Sui, Yulei},
  title =	{{Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{36:1--36:29},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.36},
  URN =		{urn:nbn:de:0030-drops-233281},
  doi =		{10.4230/LIPIcs.ECOOP.2025.36},
  annote =	{Keywords: neural network verification, branch and bound, counterexample potentiality, simulated annealing, stochastic optimization}
}
Document
Survey
DOI: 10.4230/TGDK.3.1.3
Uncertainty Management in the Construction of Knowledge Graphs: A Survey

Authors: Lucas Jarnac, Yoan Chabot, and Miguel Couceiro

Published in: TGDK, Volume 3, Issue 1 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 1

Abstract
Knowledge Graphs (KGs) are a major asset for companies thanks to their great flexibility in data representation and their numerous applications, e.g., vocabulary sharing, Q&A or recommendation systems. To build a KG, it is a common practice to rely on automatic methods for extracting knowledge from various heterogeneous sources. However, in a noisy and uncertain world, knowledge may not be reliable and conflicts between data sources may occur. Integrating unreliable data would directly impact the use of the KG, therefore such conflicts must be resolved. This could be done manually by selecting the best data to integrate. This first approach is highly accurate, but costly and time-consuming. That is why recent efforts focus on automatic approaches, which represent a challenging task since it requires handling the uncertainty of extracted knowledge throughout its integration into the KG. We survey state-of-the-art approaches in this direction and present constructions of both open and enterprise KGs. We then describe different knowledge extraction methods and discuss downstream tasks after knowledge acquisition, including KG completion using embedding models, knowledge alignment, and knowledge fusion in order to address the problem of knowledge uncertainty in KG construction. We conclude with a discussion on the remaining challenges and perspectives when constructing a KG taking into account uncertainty.
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Lucas Jarnac, Yoan Chabot, and Miguel Couceiro. Uncertainty Management in the Construction of Knowledge Graphs: A Survey. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 1, pp. 3:1-3:48, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@Article{jarnac_et_al:TGDK.3.1.3,
  author =	{Jarnac, Lucas and Chabot, Yoan and Couceiro, Miguel},
  title =	{{Uncertainty Management in the Construction of Knowledge Graphs: A Survey}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{3:1--3:48},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.1.3},
  URN =		{urn:nbn:de:0030-drops-233733},
  doi =		{10.4230/TGDK.3.1.3},
  annote =	{Keywords: Knowledge reconciliation, Uncertainty, Heterogeneous sources, Knowledge graph construction}
}
Document
DOI: 10.4230/LIPIcs.STACS.2025.50
Designing Exploration Contracts

Authors: Martin Hoefer, Conrad Schecker, and Kevin Schewior

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract
We study a natural application of contract design in the context of sequential exploration problems. In our principal-agent setting, a search task is delegated to an agent. The agent performs a sequential exploration of n boxes, suffers the exploration cost for each inspected box, and selects the content (called the prize) of one inspected box as outcome. Agent and principal obtain an individual value based on the selected prize. To influence the search, the principal a-priori designs a contract with a non-negative payment to the agent for each potential prize. The goal of the principal is to maximize her expected reward, i.e., value minus payment. Interestingly, this natural contract scenario shares close relations with the Pandora’s Box problem. We show how to compute optimal contracts for the principal in several scenarios. A popular and important subclass is that of linear contracts, and we show how to compute optimal linear contracts in polynomial time. For general contracts, we obtain optimal contracts under the standard assumption that the agent suffers cost but obtains value only from the transfers by the principal. More generally, for general contracts with non-zero agent values for outcomes we show how to compute an optimal contract in two cases: (1) when each box has only one prize with non-zero value for principal and agent, (2) for i.i.d. boxes with a single prize with positive value for the principal.
Cite as

Martin Hoefer, Conrad Schecker, and Kevin Schewior. Designing Exploration Contracts. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 50:1-50:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{hoefer_et_al:LIPIcs.STACS.2025.50,
  author =	{Hoefer, Martin and Schecker, Conrad and Schewior, Kevin},
  title =	{{Designing Exploration Contracts}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{50:1--50:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.50},
  URN =		{urn:nbn:de:0030-drops-228755},
  doi =		{10.4230/LIPIcs.STACS.2025.50},
  annote =	{Keywords: Exploration, Contract Design, Pandora’s Box Problem}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2025.4
A Bicriterion Concentration Inequality and Prophet Inequalities for k-Fold Matroid Unions

Authors: Noga Alon, Nick Gravin, Tristan Pollner, Aviad Rubinstein, Hongao Wang, S. Matthew Weinberg, and Qianfan Zhang

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)

Abstract
We investigate prophet inequalities with competitive ratios approaching 1, seeking to generalize k-uniform matroids. We first show that large girth does not suffice: for all k, there exists a matroid of girth ≥ k and a prophet inequality instance on that matroid whose optimal competitive ratio is 1/2. Next, we show k-fold matroid unions do suffice: we provide a prophet inequality with competitive ratio 1-O(√{(log k)/k}) for any k-fold matroid union. Our prophet inequality follows from an online contention resolution scheme. The key technical ingredient in our online contention resolution scheme is a novel bicriterion concentration inequality for arbitrary monotone 1-Lipschitz functions over independent items which may be of independent interest. Applied to our particular setting, our bicriterion concentration inequality yields "Chernoff-strength" concentration for a 1-Lipschitz function that is not (approximately) self-bounding.
Cite as

Noga Alon, Nick Gravin, Tristan Pollner, Aviad Rubinstein, Hongao Wang, S. Matthew Weinberg, and Qianfan Zhang. A Bicriterion Concentration Inequality and Prophet Inequalities for k-Fold Matroid Unions. In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 4:1-4:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{alon_et_al:LIPIcs.ITCS.2025.4,
  author =	{Alon, Noga and Gravin, Nick and Pollner, Tristan and Rubinstein, Aviad and Wang, Hongao and Weinberg, S. Matthew and Zhang, Qianfan},
  title =	{{A Bicriterion Concentration Inequality and Prophet Inequalities for k-Fold Matroid Unions}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{4:1--4:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.4},
  URN =		{urn:nbn:de:0030-drops-226329},
  doi =		{10.4230/LIPIcs.ITCS.2025.4},
  annote =	{Keywords: Prophet Inequalities, Online Contention Resolution Schemes, Concentration Inequalities}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2025.52
Combinatorial Pen Testing (Or Consumer Surplus of Deferred-Acceptance Auctions)

Authors: Aadityan Ganesh and Jason Hartline

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)

Abstract
Pen testing is the problem of selecting high-capacity resources when the only way to measure the capacity of a resource expends its capacity. We have a set of n pens with unknown amounts of ink and our goal is to select a feasible subset of pens maximizing the total ink in them. We are allowed to learn about the ink levels by writing with them, but this uses up ink that was previously in the pens. We identify optimal and near optimal pen testing algorithms by drawing analogues to auction theoretic frameworks of deferred-acceptance auctions and virtual values. Our framework allows the conversion of any near optimal deferred-acceptance mechanism into a near optimal pen testing algorithm. Moreover, these algorithms guarantee an additional overhead of at most (1+o(1)) ln n in the approximation factor to the omniscient algorithm that has access to the ink levels in the pens. We use this framework to give pen testing algorithms for various combinatorial constraints like matroid, knapsack, and general downward-closed constraints, and also for online environments.
Cite as

Aadityan Ganesh and Jason Hartline. Combinatorial Pen Testing (Or Consumer Surplus of Deferred-Acceptance Auctions). In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 52:1-52:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ganesh_et_al:LIPIcs.ITCS.2025.52,
  author =	{Ganesh, Aadityan and Hartline, Jason},
  title =	{{Combinatorial Pen Testing (Or Consumer Surplus of Deferred-Acceptance Auctions)}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{52:1--52:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.52},
  URN =		{urn:nbn:de:0030-drops-226808},
  doi =		{10.4230/LIPIcs.ITCS.2025.52},
  annote =	{Keywords: Pen testing, consumer surplus, money-burning, deferred-acceptance auctions}
}
Document
Position
DOI: 10.4230/TGDK.1.1.5
Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities

Authors: Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
The term life sciences refers to the disciplines that study living organisms and life processes, and include chemistry, biology, medicine, and a range of other related disciplines. Research efforts in life sciences are heavily data-driven, as they produce and consume vast amounts of scientific data, much of which is intrinsically relational and graph-structured. The volume of data and the complexity of scientific concepts and relations referred to therein promote the application of advanced knowledge-driven technologies for managing and interpreting data, with the ultimate aim to advance scientific discovery. In this survey and position paper, we discuss recent developments and advances in the use of graph-based technologies in life sciences and set out a vision for how these technologies will impact these fields into the future. We focus on three broad topics: the construction and management of Knowledge Graphs (KGs), the use of KGs and associated technologies in the discovery of new knowledge, and the use of KGs in artificial intelligence applications to support explanations (explainable AI). We select a few exemplary use cases for each topic, discuss the challenges and open research questions within these topics, and conclude with a perspective and outlook that summarizes the overarching challenges and their potential solutions as a guide for future research.
Cite as

Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma. Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 5:1-5:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{chen_et_al:TGDK.1.1.5,
  author =	{Chen, Jiaoyan and Dong, Hang and Hastings, Janna and Jim\'{e}nez-Ruiz, Ernesto and L\'{o}pez, Vanessa and Monnin, Pierre and Pesquita, Catia and \v{S}koda, Petr and Tamma, Valentina},
  title =	{{Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{5:1--5:33},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.5},
  URN =		{urn:nbn:de:0030-drops-194791},
  doi =		{10.4230/TGDK.1.1.5},
  annote =	{Keywords: Knowledge graphs, Life science, Knowledge discovery, Explainable AI}
}
Document
Position
DOI: 10.4230/TGDK.1.1.2
Large Language Models and Knowledge Graphs: Opportunities and Challenges

Authors: Jeff Z. Pan, Simon Razniewski, Jan-Christoph Kalo, Sneha Singhania, Jiaoyan Chen, Stefan Dietze, Hajira Jabeen, Janna Omeliyanenko, Wen Zhang, Matteo Lissandrini, Russa Biswas, Gerard de Melo, Angela Bonifati, Edlira Vakaj, Mauro Dragoni, and Damien Graux

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
Large Language Models (LLMs) have taken Knowledge Representation - and the world - by storm. This inflection point marks a shift from explicit knowledge representation to a renewed focus on the hybrid representation of both explicit knowledge and parametric knowledge. In this position paper, we will discuss some of the common debate points within the community on LLMs (parametric knowledge) and Knowledge Graphs (explicit knowledge) and speculate on opportunities and visions that the renewed focus brings, as well as related research topics and challenges.
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Jeff Z. Pan, Simon Razniewski, Jan-Christoph Kalo, Sneha Singhania, Jiaoyan Chen, Stefan Dietze, Hajira Jabeen, Janna Omeliyanenko, Wen Zhang, Matteo Lissandrini, Russa Biswas, Gerard de Melo, Angela Bonifati, Edlira Vakaj, Mauro Dragoni, and Damien Graux. Large Language Models and Knowledge Graphs: Opportunities and Challenges. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 2:1-2:38, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{pan_et_al:TGDK.1.1.2,
  author =	{Pan, Jeff Z. and Razniewski, Simon and Kalo, Jan-Christoph and Singhania, Sneha and Chen, Jiaoyan and Dietze, Stefan and Jabeen, Hajira and Omeliyanenko, Janna and Zhang, Wen and Lissandrini, Matteo and Biswas, Russa and de Melo, Gerard and Bonifati, Angela and Vakaj, Edlira and Dragoni, Mauro and Graux, Damien},
  title =	{{Large Language Models and Knowledge Graphs: Opportunities and Challenges}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{2:1--2:38},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.2},
  URN =		{urn:nbn:de:0030-drops-194766},
  doi =		{10.4230/TGDK.1.1.2},
  annote =	{Keywords: Large Language Models, Pre-trained Language Models, Knowledge Graphs, Ontology, Retrieval Augmented Language Models}
}
Document
Survey
DOI: 10.4230/TGDK.1.1.11
How Does Knowledge Evolve in Open Knowledge Graphs?

Authors: Axel Polleres, Romana Pernisch, Angela Bonifati, Daniele Dell'Aglio, Daniil Dobriy, Stefania Dumbrava, Lorena Etcheverry, Nicolas Ferranti, Katja Hose, Ernesto Jiménez-Ruiz, Matteo Lissandrini, Ansgar Scherp, Riccardo Tommasini, and Johannes Wachs

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
Openly available, collaboratively edited Knowledge Graphs (KGs) are key platforms for the collective management of evolving knowledge. The present work aims t o provide an analysis of the obstacles related to investigating and processing specifically this central aspect of evolution in KGs. To this end, we discuss (i) the dimensions of evolution in KGs, (ii) the observability of evolution in existing, open, collaboratively constructed Knowledge Graphs over time, and (iii) possible metrics to analyse this evolution. We provide an overview of relevant state-of-the-art research, ranging from metrics developed for Knowledge Graphs specifically to potential methods from related fields such as network science. Additionally, we discuss technical approaches - and their current limitations - related to storing, analysing and processing large and evolving KGs in terms of handling typical KG downstream tasks.
Cite as

Axel Polleres, Romana Pernisch, Angela Bonifati, Daniele Dell'Aglio, Daniil Dobriy, Stefania Dumbrava, Lorena Etcheverry, Nicolas Ferranti, Katja Hose, Ernesto Jiménez-Ruiz, Matteo Lissandrini, Ansgar Scherp, Riccardo Tommasini, and Johannes Wachs. How Does Knowledge Evolve in Open Knowledge Graphs?. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 11:1-11:59, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{polleres_et_al:TGDK.1.1.11,
  author =	{Polleres, Axel and Pernisch, Romana and Bonifati, Angela and Dell'Aglio, Daniele and Dobriy, Daniil and Dumbrava, Stefania and Etcheverry, Lorena and Ferranti, Nicolas and Hose, Katja and Jim\'{e}nez-Ruiz, Ernesto and Lissandrini, Matteo and Scherp, Ansgar and Tommasini, Riccardo and Wachs, Johannes},
  title =	{{How Does Knowledge Evolve in Open Knowledge Graphs?}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{11:1--11:59},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.11},
  URN =		{urn:nbn:de:0030-drops-194855},
  doi =		{10.4230/TGDK.1.1.11},
  annote =	{Keywords: KG evolution, temporal KG, versioned KG, dynamic KG}
}
Document
Vision
DOI: 10.4230/TGDK.1.1.8
Machine Learning and Knowledge Graphs: Existing Gaps and Future Research Challenges

Authors: Claudia d'Amato, Louis Mahon, Pierre Monnin, and Giorgos Stamou

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
The graph model is nowadays largely adopted to model a wide range of knowledge and data, spanning from social networks to knowledge graphs (KGs), representing a successful paradigm of how symbolic and transparent AI can scale on the World Wide Web. However, due to their unprecedented volume, they are generally tackled by Machine Learning (ML) and mostly numeric based methods such as graph embedding models (KGE) and deep neural networks (DNNs). The latter methods have been proved lately very efficient, leading the current AI spring. In this vision paper, we introduce some of the main existing methods for combining KGs and ML, divided into two categories: those using ML to improve KGs, and those using KGs to improve results on ML tasks. From this introduction, we highlight research gaps and perspectives that we deem promising and currently under-explored for the involved research communities, spanning from KG support for LLM prompting, integration of KG semantics in ML models to symbol-based methods, interpretability of ML models, and the need for improved benchmark datasets. In our opinion, such perspectives are stepping stones in an ultimate view of KGs as central assets for neuro-symbolic and explainable AI.
Cite as

Claudia d'Amato, Louis Mahon, Pierre Monnin, and Giorgos Stamou. Machine Learning and Knowledge Graphs: Existing Gaps and Future Research Challenges. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 8:1-8:35, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{damato_et_al:TGDK.1.1.8,
  author =	{d'Amato, Claudia and Mahon, Louis and Monnin, Pierre and Stamou, Giorgos},
  title =	{{Machine Learning and Knowledge Graphs: Existing Gaps and Future Research Challenges}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{8:1--8:35},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.8},
  URN =		{urn:nbn:de:0030-drops-194824},
  doi =		{10.4230/TGDK.1.1.8},
  annote =	{Keywords: Graph-based Learning, Knowledge Graph Embeddings, Large Language Models, Explainable AI, Knowledge Graph Completion \& Curation}
}
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